Strain
Snake_NC_035465
(Region: Switzerland; Strain: Morelia viridis nidovirus strain S14-1323_MVNV, complete genome.; Date: 2014)
Gene
ORF1a
Description
Annotated in NCBI,
ORF1a
Location
GenBank Accession
Sequence
CDS
ATGGTCTTAATCGTACCACTCAGCCGTACCAACCGGCCACCAATAACCAAACCAAGACACTTTCATGCGCTTCCGAATTACTACACCAAGTATGGAAGCGATATAATTAAAAGAAACATCTATTATAATAGTGTTGATGTAACACCGAATCCACTTACAAAAGTGGCTAATGGTAACTATATTGAAGGTGAAACAACTCAGACCAATCAAAAACAAACCAAAAAGGTTAAATTCAATGAATATATCAAAATAAGAACTTACGCAGCGGCGACAGCCAATGTGTTAAGTAATGCTGAAGAAATCAGCGTGAAGGAGGAAAATCCCCCACAACAAAATGCAAAGGCCAAAACCGATGCATTAAATGCTGAAACAACCAGCAATGCGGCGGCGAAAGCCTCTGCAGTAAAAACAACAAAGGAGGAAAATTTCCCACAACAATATGCAAAGGCCACAACCGATGCATTAAATGCTGAAACAACCAGCAATGCAGCGGCAACAGCCTCTGCAGCAAGAAATGACACCAACAAGACATCGGCAGCAATACCGTCAGCTAGCTACGCAGCTGTGGTAGCCTTTGGCTTGAATGCTGAAACAACCAGCAACGCAGCGACTACAATCTCTGCACAACAACAACAAGAAATAACCAAAGACTCAACTGCAACAGCCACTAAAGAAGATGAGTCAATGGCAGCAATATTTGCTGCAACAGGGGCCGTAACAAGAATCCGCAACCCCGCTAAAAATAACAGCTACAACAGCAGCAACATCAACATCAAGTTCTTATGTCAAGCCACGAACGACCCGATCACAACAACCAAGGTCCACGGCTTCATTCAACCACACGACTTCAGCTACAATGACAACTCTGAAAGCGTCACAGTCACTAACCATCAACTCCAGTATGAATGTGACAAAGTCAGCCCAAGCAACAACCAGTGCATCAACACCGCAAGAGAACTCGTACTCGCAGCCATCTGTAACGCAATCACACAAGAAGAGTACAACATCCTCAAATTCACCGAGGTCACCAACTTCTCAGGGCTCAAAGGCATACTCCCACGAGGGTATACCTTCAATGCGACACAACACGTCAACAACTTCACCATCGCAATCTGGAAGCATCACGAACTACCAGTCACCCACGTCGCAGTCATCAACACCGACGAAGTCAGTACCGTCATCTACGAAACCAGAGACAACGAAGTTGACTTAAGCCACTTCAACACACCTCGTCTCTACGAGCTCGTCAAAGTCAACACCGAACCAGCTGACAAAGTCGTCAAAGTTACCAACGAAAGTGTGATGTATAACAACTTGTTCTATTGTAGCGAAGATCTTCCAAAAGACTATATCTTCATACCAAGCTTCACTACCAAAGCTAACATCAAAGTCAAACCTAAGTCGCAGACTCTCGATATCAAAAGCAAGTACCAACAATTCAAAGATGAGCTGCATGACTTAGCAAGAACAACACCGTTTAATCCACCACCACAACAACAGACACCAATCTATTCCCAACTAGCCGGAGACCATAGATACTTTAACGGTGAATTTGTCATAAGTGGAATAGGCAGACAAACTGCCAATACTATCACCAACGTGACAACCGAAGAAAGTAACAAGGTTTTTAAAACTAGGCTAACAGCAGCTAGTACTTATCTCCAGGCCAGAGAAGTCAAGAAAAACTTCCAGGCACAGAGAAAAGTTGAAACCGTCATCACCAAAGGTACCAACATCTGGTCTCCACTCAAGCCATCACACACCGTCAGGCTAGGTCATGTCTGTAATAAGAAACACAACTTAAACTGTAAAAAAGAAATAGAAAAAATCTTGTGTGATATGTGTAAACAACAATGGTATGGCCAAAAAACAGGAGGTGTCTATGACACCGAAATTGACCAAACAATTGTACACACGCAAATGTGTGTGTCTTGTGCCATTGAAATGGTGGATTATAACTGTGATTGTGATGGAAGTGTTGAAAAAATAGTTCCATTTAAAAATAAAAGTTTGACTCCACAACAGATGAAGCAATATTTGAGTAATAAAAATATACAATTTGGAAAAATTAAAAGTGTGAGTAAGGAGTTTGAAAATATCCAAGATAAACAATTTGTTGGAAATTTTTTTCACCATACTCATTTTGCATTAAGAAATGCAAATAAAGTAACTAAATTGAGTAAATTTAGTTTTGTAAAAGTTTTTGATAAATGGTGGGACTTACCTGCGTTTGGAAATCCAAAACAGCAACAACAACAAAAGCCCAGACAGCAGCAGCAGCAACATGCTCAGAGCCAGCCTCAAAAACAAAAAGAGGAGCAACAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCTCAGAGCCAGCTTAAGCAACAGCATCAACAGCAGCAGCAAGTGTATCAACAAAAGAAAGATATAGCTCACCAACAACAACAAAGTCAAAAACAGCAACAACAAGAAGAATTAATAAAAATTTTAAAAAATAAATTGCAGCAGCAAGAAGAAAGAAATGAAAAATTATTGCAGCAACAAGAAGAAATGAATAAAAATATGGAAAGAATGCAGCAGCAAATGCAAATGCAAATGCAGATGCAGCAAGAAATGCAAAAAGATTATATGCAACAAATGCAACAATTGTTGCACCAAAATAATAAGCAACAACAACAGCGGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCATCAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAGCAGGCCCAGAGCCAGCCCAAGCGGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCATCAACAACAAAGGAAAGATGCAGCCCCAGGGCAGCGGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCATCAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAGCAGGCCCAGAGCCAGCCCAAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCACCAGCAGCAACAACACCAGAATCAACCAAAACAGATGACTCAAGAAGAATCTGTAAACTACATCAACGACTTAGTGCACTCACAATGGTTCACTATAGTAACCAACGAGATGAATAGGCACTATAAAAAGAATGCCATCTGTCGCCATAATCTCTATGGCAAATGTCGTTTTGGTAGTAAATGTAAAATGGCCCACATTAGCCTCAACGGCAAGTATGGACCATTACCTAACCAAGAACAGCAAGAACAAATCAAGGCAACAACAGTATTGCCATGTCGTAATTATCTGCAAGGGTGTTGTAATTTTGGTGATAAATGTAATAACTTGCATAACTATATCAATATTCAAAGAGTAAACGAAGAGCTGAATAAAGGCAACCTGTTTTTGTTAGTTGTGCCAAAGGGTTTTAAAACAAAATATGTCATAGTCAGCGAGCAACAAATGCAAATACAACAACAATTGCAGCAGTTGCAAGCTGTAAGTGACAGTAAACAAGAAAAGCAACAACAACAACAAGAAAAGCAGGGAGACCAGCAAAAGCAGGAAGACCAGCAAAAGCAGGAAGACCAGCAAAAGCAGGAAGACCAGCAAAAGCAGGAAAACCAGCAAGAGCAGGAAAACCAGCAACAAGACCAGCAGCAGGAAAACCAGCAACAAAACCAGCAGCAAGAAAATCAGCAACAAAATCAGCAGAAGGAAAACCAGCAGATGCATGATCAGCAAAAACAGGATCAGCAAAAGCAGGAAGACCAGCAAATGTCAGAAAGCTGCCAAGAGCCTGAAAATCAGCAACAGCAACAACTCCAACAAAGCCTAGAACAGCAACTTCAAAAACTCCAACTTCAAAAAGACTTTCAGATAAAAGTTAAGCAGCAACAACAAGAAATTCAAAAGAAAAAAGATCAAAAGAAGCAAGAAATGAGGCAGCTAAGGGAAAAGTTTTATCAACAAGAAAAATTGTCAGAAAACAGTCAAGACAATCAGCAACATCAGCAAAAACAACAGCAAAAACAACAGCAAAAGCAACAGCAGCAGCAGCAACAGCAACAGCAGCAACAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCCCAGAGCCAGCCCAATTGGCAGCAGTCCAAGCAACAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCCCAGAGCCAGCCCAATTGGCAGCAGTCCAAGCAACAGGCTCAGAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCCCAGAGCCAGCCCAAGCAACAGCAGCAGCAGCAACAAGCGCAGCAAGAAGATAATAATAGTATTGCTGTTCAGTTTCAAGTTTTTGATATAACGACTTCTAAACCACAGCGACCCAAATATCAAACTAAAGTCATCAATCTCATACAAGGTACTCCACTCAACTTGAGTAAACCAGACAGCGAATGTAATACATGTCAAGACGCTGTTAAGTATCTTGTAAAACAGGGTCTCAAAAGAGTCGTTACAGTGTTTGATAAAAATAACAAGCAGCTGAGTAAATTTGCTATTGTTGTAGCCCTTAAAAGCCACTATGGTATCTTTGAATCAGGTAATCCCCACGAGCTGTATAATGGTGACGTTTACAACGAAATCTTGTCTTCGTCTGTCGAAGCTGTCTTCGTCCCAACTTTTTCTATAATACAGCACAAATCTGATCATTGGCAAGGCGAACAACAACAGAGAGAGCAGTCTGACAACCAACAACAACAATGTCAGCAACAACAGCCAGAAAACTCAACGCAACAGCAACTAAGTCAGCAGCAACAGGAAGAATTAACACAATGTCAACAAAGTCAACAACTGTTAGCCTTAACGCAAAGCCAGCCCCAAAAACAAAAAGAGGAGCAACAGGCTCAGAGCCATTCCAAGCAACAATACCAGCAACAACAACAAGCAAACTCGCCACAACGTCGACCAATACCATCCAGCAACATCAGCAGAAAGTCTAGGTTTGAAATCACAGCAGTACATGAGGCAAGTAGAAGTATAACAAGCACCAACACCACTAGTAGCACATCTACAAGCGAAACAAGCAACGAAGAAACCACCACCACCAACAACATCGACCACGCAATCCAATACCAGAACTTCGTCAGCGACTTTCGCAAAGCTCAAGCTAACTTCAAGTACCTGTCACCACAATTCTGCGGAAATCTAGTCCAATATAACAAACATAACTTCGACATCTTGTATGCAAGTAGGTTTGTCGAAATGGAACCTATGCCAACCAAAAGGTACCATAGTGACAATTTTATATTCTGTAAAGAAGAAGCAGGAGTATTGTATGGCTATTACCACAGCGACATCAGTGAGGCAGTCTATGAAGGCGTTGATTTTCCATGCTTCGTCCACCGAGAAGCATTACAGGCAGCCGATTGTTATGTAAGCAAAAGGAATGCTAGCATCTACCACAAGAACGACATCTGTACATCATCCGCTAACTTGCCACTCCAGTTCGAAGTCGAAAAACACGTCTGGACAGCTTCTAAATGTCGAGCCGAAGGCATCAAGATCGACAAGAAGATATCACTCAACACCAAGGTCATCGTCTGCTATCGCTATTGTCAACTCGTCGAAGGCAAAGATATCTTCCAACGTCACGTCACGAACTTGCTCAACCAACACTCCAGCCAAGTCGGCGATGACGTAACAGCGACTACAGACCCACTCCGAATCGCAAGGTCACAAGCCAGTCTATTGTTGAAACTCATGGAACAACATCTCCGCCACGGCATCTGTATGAGCATCAACAACTATCTCAACTGCCAATCAACCGAATTCTCACTCACCTTTAACAACTTCAACTTTAGTATTACCAAATTCGTACTCGCAAGATACCAACTATGCCCCAATGGCAACGAAATCGAACCAGACTTGCACGGCATTTTCATCAAACAGCTTTGCAATCAGGTTAATTTCAAGTATACCATGCCAGAAGAGCTAACACCGAGCAACTATGGCAAGGTTATCATAAACATCATCAAGCAAAACACCGTCTGTATCGATGCGAAGATACCATACGAATTTGAAGCTCCAGATAGCTTGGACGTACAACCCCAAGTTGATGATATCGATTATAAAAAATTAATCGGTAGAGGAGCATATGGTAGAGTTTTTGGTAGTGTTTCAGGTAAATATGTCTTTAAGCTACAGGGCTTACAAGGCTCACAATATGAGCACAAGATATTAAACCAAGTCAAACATCTCAACGTACCACAAGTAGTACAACACTACGAATTTCCAGAACAACAAGTAGGTATAATTAAGATGAAAGCTCTAGGCTTGAGGACATTAGACCTGTTAAAAGCAGAAGAGAAACAAGATCTAAAAACCAGGCAAGACATGCTAATGCAGTGTCTAGACCATCTCGAAGATGTGTTGAAATGTGGTATAATACAAAACGACTACCACATGGCTAACATCGCATGGACAGATGAAGGCGACTTTGTCGTCTTAGACTGGGGAATTGCAAAGCAAAGAAAAGAAGGTCAAGAAGAAGAGTTCAAAGCTATTGCGTATGGATGGTATGTCAGCTTAATTGTCGACGTACTAGCCAATACGTTTTTGGACTATCATGACAAGGTCTATTATGTTGTTAAAGAAAAAGATCTCTTGTGTTATTATGAATGGTTTATGGACGAGAAATTATTTATCAAGACCCATCAAATATTTGGTGATAAGTATCACGAAATACTCCACCACCCACCAATTCAAGAAGAAGAGGAGGAAAGTGAGAGTGAATGGGAATCAGATTATTCAGAAGACCAGGACCATGATCAGTATGAACAACAGGAGAAACCGCAGCAAAAGGAAGAGGAAAAACCTCAGGAACCTCAACAAGAGCTTCAACAGCAACTGCAACACCAACAAGTTGATCAGCAACAAAAAGAAGAGGAAAAACCCCAGGTAGTTGAATCCCAACAAGAGCTTCAACAGCAAGAGCTTCAACAGCAACTGCAACACCAGCAAGTTGATCAGCAACAAAAGGAAGAGGAAAAACCTCAGGAACCTCAACAAGAGCAACAGCAAGAGCTTCAACAGCAACTGCAACACCATCAAGTTGATCAGCAACAAAAGGAAGAGGAAAAACCTCAGGAACCTCAACAAGAGCAACAGCAAGAGCTTCAACAGCAACTGCAACACCATCAAGTTGATCAGCAACAAAAGGAAGAGGAAAAACCTCAGGAACCTCAACAAGAGCAACAGCAAGAATTCCAACAGCAACTGCAACATCAGCAAGGCAAGTCACCAAGCAACTACACGAATATAAGCAGTCTAACCACACTCGTCACCAACAAGCTCAACTGTGTCAACAACGAAATCAATAACATCCAGCAACAACTCACAAGAATCAAGAAAGGTAAAGCAAAGGCGCAAAAAGCAGCACTCAAGGCCAAGCTCGAGAAGCTTAACAGAAAAAAGACTGAATTCGAGAGGCAGCTGAACTGTAAACCCAAGACTTCCAACCAACACGAAAGGACAGGGCGACAGTCAAATGTTAAACGTAACAGTGAACTCGACCAGCCCACCTGTAAACCTAATACTTCCAACGAACATACGAAGACAGGGCAACAGTCAGAAGCTAATCGTAACAGTCTATACGAGCAAGACACCAAAGACGTCTCACCAGCAAGCAGTCTCGACAACATACCTAACATCCACGACGCAATGACCAAAGCCGAAAGAAAAGCAGTTGACTGGTTTGAAATGACAACTTCACCATCCACAAGCGCCACAAGTCTCACCGCAAGCACTAGCAGCTACACCACCAGAGCTACAGGCGAACCAGCCAGCATCTTACAAGAACCTAGTGCCACAACCGACCCACAAGAGCCTACAAGTGTCAACTCAACCACAAGCAGCCACCGTCACAACACCGACGAACAAGTGTCTATAAGAGTTAAACCCATAACTGTCAGCAACAATGGTCAAAGAAAAGAAGCTAGCATTTTATCCAAGAAAGATAACATTGAGTTTCGTCTCAACGAAGTCAAAAAGCTGCTAGGTAGTTTACAGCAAGTCAACACCAACTTGCTAAATGAAGATCAAACTTTCTGCCACAACGAGGCACTACGACTATGTATCGAGCAAATCCATAGTCTCGCAACTGAAGTCAACGATCAAAGCGTCAGTAGCTCCGAAAGGAGTGACAATGTTCAACAGATACAACACAGCCGCGACATCCAAGCTACAAGTCGTGAGAAGCGACCAAAAGTCGACAAACTCCGCGAGGTCTCAGACATCACGATCAGCACAAGTACTACAGCTACAAGCTGTAAGCCAGGAGTCAATCGTTGCTTCATCTACGCAGCTGAGGCAGCACTCATGACAATCGGCAAGTATTTCACCCAAGAGACACTCAACGACTTGTACAAACTCGCAGACAAAGGCCAACACGACGCATCTGAAGTTGTCGCAAGAAGCGGAATTCCGACCATCCAAACAGCCAAGTGCATTCTCCACGGAACTTGTGAGCTAACGTCACCATGCTGTAGCAACGTCGTACCTAACACGACAGCTACGCACATCTTGATCAAACAACATCTCGGCGAAGCTTCAAGCTATGGGCTCGTGGTTATACAGCCACTAGCCTATTTGCACCACACCGGAAACGCACTCAACGGCCACTGGAAATGTTCCTACAACACACCACAAGGAACCAGGAAAATGAAGGACAGCGGAGTCACAAGCAACATCAACAAGCACCCGAAGGCTACATGGACACTCTGTAAAGTCATGCTCAACACGAACCTCGAACTCGCCAACGGCGACGTCGTAGGCAAAACGAACATCACCATCATCAGCCAGAACATCAACCTCGTCGCTTCGCTACTAACAGCCCACGGCGACCCAGTCCACCACGACGCAACGACACTCGCCATTGTCCGAGGCAACGACGCAATCACCGTCGTCACTCCAGAAGCAGTCGACTACAAGACACTCACACCGAAGTCTACAGTCTACTGCCTTGAGTATGAACCAGCAGTCTCCAAGAAACTCCACGCCACGAAATGTCAACTCCACGAGCCACAAGCACCAGCAAGCTCATTCGCACTCGACAGCAAGAATAAAGATGCGAACATCAAGGCTATGCAACGCAACCTCCGCCAGTATCTCACCAAGTATTACAGCACGAACCTCACCACACAGGGTCCAATCAAGACACTCGTGGTGGGCATTGGCAAAGGCAACGACATTCCACACTACGCAGCTGCAAATAACGGCAATGGAATCGTCTACGACGGTTGCGACATTAGCAACGAGGCCCTCAACATCTGTGCCACGAAAGTTCCAAGCACCACAACGCTGTATCAGAGTGACGTTAACACAAAGCAGTTTGACAAGCTATGTAAGAACTATGACTTGCTCGTCAGTACTTTTAGCTGGCACTTCAAAGATCAAGTCAAGTGTGGCAAACATCACGAGTTCCACGTCATGCCAATCTACAACCCAGACACGTATGACACGTGGAGCAAGTACTATGATGTCACAGTCCACGCCAAAGACGAAGCCAGCATCACACACACTATCAACATGCCGACATGTCGAACTATCGAGACACTCCACACTACCGAATGGTGGTATGGACAGTATTGTAGCAACGTTATCATCAAGTCACTGCAGACAGAGCTCAACTCAACCAACAAGCACTTCAGCAACTTCATAATCTTAATCCACACCGGACACAAGACTTCAAGCACAAGCACCAAGAAAACTGCAAGCACAAAATCAACACCAGTCAGCAGAGGCAGTCCGTCAAGTTGCTCAAGTAATAACTCCATGACCAGCAACAGCAACTGTACCGAAACAGCAAGCTTAGCCAATAGTACAAGTCAGTCCACCACGACAACACAAGTAACTCGCAACCAGAACGTCAAGGTGCCACAGCTACCAGCAGACAACCACGACTGTAATACAATGTATCCAGAGGACGCCGACGACGAGAGGACCGAGTTTGAGCAGTGTCTCAACAAGAGTAACATTCCCATCACCATACACTCATGCAACTCCGAAGACTTTATTGACACAGCGTACGCAACTCGACCAGAGAACGTCAATGCGTTTTTCTGCCGAGAGTTTTGTACAAACTGTTTCGTCCATCTTCCAAAGAATGCAGTCGTCGATAGGCAACTCCTCACGAATGCCCAAGTCTACCTCAAGTGGAGTGGCATTAGCGTCAACGAGCTCAACTACAACCTGATCTCAACACTGCACCAACGTCAAGTCATCTGTCTCGACCACCTCGAACCAGCACCAGCAGCCACCGACGACAACTGGGTCATCAGACGCACCACCACCAAACCAGTCAAAGTGCTCTACATGTCCCACGACGTCTTCAAAACTATCGACTCCACACAAGCTGCAATCTTCCACCGCGACTTCGACATCTTCACACACCAACTCAGCAGATTTACCAAGAGACCAGTCCAGAGCGTCGTCATCCACACAAGCAGCAAGGACGAGGCAGAAGCAGTCTGTAACACACTCGAATACTACAACATCACCAACATCAAAATCGCCGAACACCGAGTCGGCAAGTTCGAGACACTCGTATTCGACCGCAAGACATGTCAGTACGAAACACTCCACATCGACAAGAAGCGAGCCGGCATCTGGGACCAAATCAAACAGCACTTCCACGACATCAAGAAACCGTATCTCATCGAATGGAATAACATCACCGAAGAATGCAGCCACGACGACAAGTATAAAGCGATAGCTAGCTTTAGCGACAAGCACGGTCTCGATAGCTACCAACGGCTCATCGGCTCTGACAAGTGCGTCTTTGTCGACTACAAAACAGGCATCGACACAAACCCAGACAAGCTCGATGACTACTATCGCAGCCGACACGCCACCGAAACAGGCAAGGAAGTGGTCTATACAGCAGTCTTCAAACTACCACCAACCGACAGCAACGACTCCAGGACAGTCTTCGCAGCGCTCGCAGTCACAAAAGATGGCAAATCACTGTACATCAACGGCGACAAGACATCAATACCTGCGACAGCAGTGAACAAGGCACTGTATCACATCATGCAAGCAAGGTACGGTAACAACACGAAAGTCATCGGCGAAGTCTACTCCAAGTTCTTCAGCCCAGAGAAGGAGACCACAGCAGCTTACAGCTACAAAGATCTCTTTACAGCTCTACCGTTTATGCTATTCTTATTGCAACCTGGATTCTTCACCTTCGCACTGTCACTCTTAGCCATGGCTTTCTTTCTCTTTGACCGAAAGGCTCTGTTCAATTCTGTCACTGCAACACACCAGCTAGTCACCACAGCAATCGAGTATGAAACCACAGCAGCTATGAGCTATCTCCGTCTCGGTAACTACAAAGTCACCAAGTACATGATCGCCACAGCTAACGCATTCATCTGTCTGTATCTGTTGTTTTGTGCTTATTGGGCATGTGTGTCAAACCACGACCTCATCGACACTACACAGGCACCGTATCACAGCTACGCACAGCGCATACTCGCATTCTTCGACTACATACCATCAGTCCACGACTATGCCAGCGCAATCACACTCAAAGAACTCTGCGGATCGAACATCATCTGCAGACTAGGATCACCGTACAACAAGCTGTACCTCGATCAGTACAAGCACTACGTCACGAATAAGAGCTACGTCTTTCGTGATAAATTGTTGTCTCTGTGTTCATTCTATACACCATGGGGTCTGTTGATGTGTTGTCTCGACTTTAAACCGTCATGGCATTTAGCCATCTACAACTTGCTAATGACAATCTGCATCTGTTACTTCATCTTTCGCCGGTTCTTCACGTGTTGTAAAGCATCAGGCCCATTCTGTGCTAAACACGCATTGCTCCGCACCAACAACATCCAGTATTACTGTAGCGGAAAGCCACACAACATCCAAGCCATCAAAGTCAAGTACTGTACTAAGCACAAATGGTGGTGTAATACAACTCAAGAACACTTATTGCCACACCCAATCGCACGAGTCATCGAAGCCTCCACACAGATGCAGACTAATTACATCAAGTCTGATAACTACTTTAGGTATGTCAGTCAACCTGCAGACCGAGAGCTGCCAGAAGCCTTCAAGGACTACAACCACAACAACGTCTACAGCACCAACAACTTGTCATACCTCGAGTGGACACAACGAGCAGCTCTCTTCGCACACTGCTCTAGCACCAAAGTCAAGATCTCAAGCCACGACTCAAGCTCCATCACCAACCAAAAAGTCGAAATGACACAGGCAATGCTCGACTACTTCAAAACCAACGAAGACTGGCGATATAACTACGTCGCCGCACAACAAGCAGGCCGTAAGAATGTCTTACATGTCGGGTTTCTTGAAAACATGTCCGAGAAGGAACTCAGCGAGTTCTACGAATTCTGCTGTCAATACGATCAAAGCTTCACCAAGACTTGCATCAAGAGAGACAACTTTCTCAACGGCAAGGTACCTGACTGTTTCAAGTCTAGTCGTCTGCTAAGTACCAAGTATCACACCGACACGATCTATCTCGACAGCTTCGCAGTCGAGCACCACGACGACATCAAGCAGCAAGCGAGTCTAAATCACTTCTTAGTCTCACAAGGTAAGCCTAAGAAGTACATCAACTCCAAACGCAACATCTTCATCGCACTCGCCATCTTAGTTCTGCTCGCACTCACACGAGTAGCTTATCGTAAAGTCGTCAAGATCAACACTCCAGCAGGACTCAATCCAACCGGCAAAGACTATGCAAAAGGAACACTGTACCTCCACGACTCTATCATCGCAACACCAGTTGCGTATGGCAACAATCGAAAAGTCCAAGCATGGCACTTCAACAACGGCACATTCGCATTCACCGAAAAGCGCAGTACACTCACCGCAAGAACATCATGCGGTGATTTTGATAACAGCTTCCTCCAAGTCGAAACCTACCACCAGACATGCGACCAGTACTGGCCACTTGCCATCAACCTCTTCAAGCTGTCTATTTACTGGTTCCAAGCAGACAAACCGTACACAACACGCCACGGTGATTATTTTTCACAAGACGGTGCAATCTGTTTCGGACTCTCAGACTCACTAGTCTGCCACGAGACAATGTCAATCTACACACCAACAGCTTTCATCTGGATCACTTCTAGTGTTGTGTTTTGTTTCATCTTTAGCATCTTTTGCTATATCAAGATTCGAGGCTACTTTGGCAACTATACAAGCTCAGTGCTCGTCCTCATGACAATACACGCTATCACAGTAGTGTTGTATTTGTTCGTGCCAGGTCTTGCATTCGTGTTTGTTATTGCACTGTTTTTCTTTCCAGCATATCGCCTCGTCATCGGTACCTATAGCTTTGTAGTCTGTTCTATGTTCTTTGGTCTTAACTTGGTCATACTGTTTGGCCTATATATCATCGTCTTTCTAGTCATCTTTTGGTTCTCACGACAACGAACCACCGACGTCGAGTATACGCCATCAGGAGTCATTTTCAGTTCTAACTTCAGCGGAATCGCAAAGAATGCATTCCTTCTAACACCTGAAAACGTACCTACCATACTCTCAGTGACCGGCAAAAACTATGCCCATCTACTCGAAATGTCAACAGGACCACAACTCAAACCAGAGACAGCACTCGCCAACGCAATCCTCAAGTGTAGCATCACCAACACCAAGATGCTCTACGAGCCACCTAAAAGTACAAGACTGCCAGTCTACTTGCAGTCTAAACTTAACAGGCTCGGGGATATTGTGATCAACAACGCACAGCTCACCAATATCTGTGGTATTTATGACGGAACTGGAGTCATCGGCCACGGTATCTTTACAACACCTACAACAGTCCTCACCGCAAGGCACTGTTATACACCGACCATCCAAGTCTTCTACCGAGGCACACTGTTATCAGTCAAAGACCACAACGATACAGGCTTTAACACGATACTCATAGTCGACAAGCAGATAAACATTAAGCCACTCGCAATTGACAACCACCATGAACTCGAACTTGGCACCCAGTATACGCACGTCGTCTCACCACTCGACGACCAAGCTACAGTCACAGTCCACCAACTGTACCCTACACCATCAGGCCACTTCGCCCACGCACTCACCATCGCAGGCGAATCTGGATCTCCAATATTCTACCACAACAAGCTCGTCGGCATCCACCAGGCAATGGTTAAGTCTAAAGAAAACACCGGAGCCCATGCAATCGCATGCCGCGTCGACGGTACGCCATTTGACAGTAGTTTTCACGACACCCTCATGGCAGCAGGTAAAGTTCAGTTTGACGGCAACGCACTCCTCAACCACTATCTTACTAACGAGTGCCGTAAAGTCATACCAGTCCGCGAGTTTAACAACCAGATCGCCGAAGCCAACAAACTCATCGGCAACTACAACCACATCAGCATCATCAATGACCACGCACTACTCCAAGCCGAACCACGAGACTTAACACCGCTCATAGATTTTCTTAAAGGCTCACCAGTCATCAGGGACTATCACTGTAAACCATACAAGATAGGCAACGACATCAAGCTCCAGAACAAGTTCAGTCACCGTCTTATCGTGTACTGTACACTCAGCAACATGCTCAGTCTCGCCATGACAGTCACGTACTTTCTCACAACAGCCATCTATGGTACGCTCACCATCAAGAACTTCATCGACTTACTACTCGCGGGTGCCATGCTCACGGTAGTCTTTCGAAGTAGGCATGTCGTATTCCTACTCACAACAGGAGCGTATTTTGTTAACGTCATCGAGCTATTTATGTACGTCTGTCACACCAATATCGAAGTCATCCGAAACATCTTCTCCAGCAACGACGAAATCTACGCCCACGTAGTCCAAACAGTCGTCCGTTTCGGTCTTCAAGACATCATGCTATGTACAGTGATCTTGTTTGTAATGTTGCTTAAGTTTATCTTATTGCCACTGCGTTGTATCATCTTTACCATCGTCTACTGGACACTTGTCTACTTCTTTGGTGTCATCAACTTCTACACCGTCGCAGTATTCATCTTCAGCTTTGCCAACACGTCAAGCTGGTTCACTTGTCTGACACTACTCTTACAGAACACTATCTACTTTCCAATTTGGTTCACACTCAACATTGTCTTATCTATGCGCATCAGCTGGCCTAAATGGCTGATCAACAGATACCACCAAATCACCTCAGACAGTGTCCGAGTCAATCGAAGCTTCTTCTGTCACCACCTCGCAGTCTACCACAAGCCACCATCATTCTTCGAAGTGCTCATCAGCCAGATGTTCTACTCGCAAGAAGATGTCATCGAGTACGTACCACAGTCCAAGATCGTGCCGTACGTAGTTGTTGGCTCTGCAACACACTATCCAAACGTCAACGCCAAGAGTCGTGCACTCATGTCAGGTAGTGATAGTGATACACTGTATGCCCACTTCATCTCTGCAGTCGAGGCAGTCTTGCAATCAACAACTGCAGCCGACCAACAAGTCTTTATGACATGGTGTGCTGCAACTTGTGACCAAGAAACGCTCGAAAAATGGCTCGAAGACAACCCAGAAGATACTTCTAACAAGCTACGCACTAAACGCCGAAACATCATCCAAGCCAGGATCATGTTTCTGAAAGCAAAAGAGGAAAAACTCCGCAAGCAAATTAACCTCATGCAACTCGAACAAGTTCGAGGCATGATGCGTAGTGAACTCTCCATCAAGCTATGTGACGTACTCAACCGCTCAGTGGCCGAAATGCAAGAAAAGGCAAACATGCGTACCAAGACATTCGGCAAGGGTATCATCGCAGCAAGCACACTCACAGTGCCTGAAATGCTCGTCATCACCAACACGAATGGACGAGACAAAATTAGCTGGGACGATGAGTCTGAATGTTTTTGTTTTGAATTTGAAGAGGCTATCTACCACATCGCCGAGCTGAATACCAACACAGGGCAAGCAATCCACACCGAAACCGAACTCAACTCACTCACAGCCACGAACTTTCCACTGTACGGTAAACTACAAGACTTCAACTTCGACGGAGTCGTAAACCAAGCTAACATCGGCTATTCGATCAAACCACACCAGATCCGCATCATCCGATCAAGCTCAGGCATCAAAATCGAGTATGCATCAAGCTCCGACAAAGCAGCCAAACCGATCCTCGAAGAAGTCCAAGAAGCAACCGACAACACAGTCTTATTGGTAGCCGACGGTGTTCTTAAGCCATTCAAAGTCAACTCACACGTGCAAGCACCAATCCTCGCAGCTGTCATGGCAAAACTACGCTTCGACAGTGTAGACTTGCAATCTATCAGACTCGGTGGGCTTGAAAATTCCACCGAGCATGTTGCCACTTCCAACCAGCCACTCCGATGTCGAGGATATACGACGTACTTCGCACCATCACTCTGTAGGTACTGTCGTACGAACATCGAACACAAGTGTAAATACCAACAGTTCGTGCAAATTCCAGCCAACGAGGAGCCAGACCAGTACCTAAGCAACCATGACATCTGCCAACACAACAAGTTTATCTGTAATACTTGTCACAACACAGCTTCCAACCAACAACGAAGCACCACAGTCAAACCAGCTGAAAAACTCCGCAGACTGCGAGAGCAGGCAAAAAACTCGTCTCGTCCGCAGTGA
Protein
MVLIVPLSRTNRPPITKPRHFHALPNYYTKYGSDIIKRNIYYNSVDVTPNPLTKVANGNYIEGETTQTNQKQTKKVKFNEYIKIRTYAAATANVLSNAEEISVKEENPPQQNAKAKTDALNAETTSNAAAKASAVKTTKEENFPQQYAKATTDALNAETTSNAAATASAARNDTNKTSAAIPSASYAAVVAFGLNAETTSNAATTISAQQQQEITKDSTATATKEDESMAAIFAATGAVTRIRNPAKNNSYNSSNINIKFLCQATNDPITTTKVHGFIQPHDFSYNDNSESVTVTNHQLQYECDKVSPSNNQCINTARELVLAAICNAITQEEYNILKFTEVTNFSGLKGILPRGYTFNATQHVNNFTIAIWKHHELPVTHVAVINTDEVSTVIYETRDNEVDLSHFNTPRLYELVKVNTEPADKVVKVTNESVMYNNLFYCSEDLPKDYIFIPSFTTKANIKVKPKSQTLDIKSKYQQFKDELHDLARTTPFNPPPQQQTPIYSQLAGDHRYFNGEFVISGIGRQTANTITNVTTEESNKVFKTRLTAASTYLQAREVKKNFQAQRKVETVITKGTNIWSPLKPSHTVRLGHVCNKKHNLNCKKEIEKILCDMCKQQWYGQKTGGVYDTEIDQTIVHTQMCVSCAIEMVDYNCDCDGSVEKIVPFKNKSLTPQQMKQYLSNKNIQFGKIKSVSKEFENIQDKQFVGNFFHHTHFALRNANKVTKLSKFSFVKVFDKWWDLPAFGNPKQQQQQKPRQQQQQHAQSQPQKQKEEQQAQSQPQKQKEEQQAQSQPQKQKEEQQAQSQLKQQHQQQQQVYQQKKDIAHQQQQSQKQQQQEELIKILKNKLQQQEERNEKLLQQQEEMNKNMERMQQQMQMQMQMQQEMQKDYMQQMQQLLHQNNKQQQQRQQQQQQQQQQHQAQSQPQKQKEEQQAQSQPKRQQQQQQQQQQQQHQQQRKDAAPGQRQQQQQQQQQQHQAQSQPQKQKEEQQAQSQPKQQQQQQQQQQQHQQQQHQNQPKQMTQEESVNYINDLVHSQWFTIVTNEMNRHYKKNAICRHNLYGKCRFGSKCKMAHISLNGKYGPLPNQEQQEQIKATTVLPCRNYLQGCCNFGDKCNNLHNYINIQRVNEELNKGNLFLLVVPKGFKTKYVIVSEQQMQIQQQLQQLQAVSDSKQEKQQQQQEKQGDQQKQEDQQKQEDQQKQEDQQKQENQQEQENQQQDQQQENQQQNQQQENQQQNQQKENQQMHDQQKQDQQKQEDQQMSESCQEPENQQQQQLQQSLEQQLQKLQLQKDFQIKVKQQQQEIQKKKDQKKQEMRQLREKFYQQEKLSENSQDNQQHQQKQQQKQQQKQQQQQQQQQQQQAQSQPQKQKEEQQAQSQPNWQQSKQQAQSQPQKQKEEQQAQSQPNWQQSKQQAQSQPQKQKEEQQAQSQPKQQQQQQQAQQEDNNSIAVQFQVFDITTSKPQRPKYQTKVINLIQGTPLNLSKPDSECNTCQDAVKYLVKQGLKRVVTVFDKNNKQLSKFAIVVALKSHYGIFESGNPHELYNGDVYNEILSSSVEAVFVPTFSIIQHKSDHWQGEQQQREQSDNQQQQCQQQQPENSTQQQLSQQQQEELTQCQQSQQLLALTQSQPQKQKEEQQAQSHSKQQYQQQQQANSPQRRPIPSSNISRKSRFEITAVHEASRSITSTNTTSSTSTSETSNEETTTTNNIDHAIQYQNFVSDFRKAQANFKYLSPQFCGNLVQYNKHNFDILYASRFVEMEPMPTKRYHSDNFIFCKEEAGVLYGYYHSDISEAVYEGVDFPCFVHREALQAADCYVSKRNASIYHKNDICTSSANLPLQFEVEKHVWTASKCRAEGIKIDKKISLNTKVIVCYRYCQLVEGKDIFQRHVTNLLNQHSSQVGDDVTATTDPLRIARSQASLLLKLMEQHLRHGICMSINNYLNCQSTEFSLTFNNFNFSITKFVLARYQLCPNGNEIEPDLHGIFIKQLCNQVNFKYTMPEELTPSNYGKVIINIIKQNTVCIDAKIPYEFEAPDSLDVQPQVDDIDYKKLIGRGAYGRVFGSVSGKYVFKLQGLQGSQYEHKILNQVKHLNVPQVVQHYEFPEQQVGIIKMKALGLRTLDLLKAEEKQDLKTRQDMLMQCLDHLEDVLKCGIIQNDYHMANIAWTDEGDFVVLDWGIAKQRKEGQEEEFKAIAYGWYVSLIVDVLANTFLDYHDKVYYVVKEKDLLCYYEWFMDEKLFIKTHQIFGDKYHEILHHPPIQEEEEESESEWESDYSEDQDHDQYEQQEKPQQKEEEKPQEPQQELQQQLQHQQVDQQQKEEEKPQVVESQQELQQQELQQQLQHQQVDQQQKEEEKPQEPQQEQQQELQQQLQHHQVDQQQKEEEKPQEPQQEQQQELQQQLQHHQVDQQQKEEEKPQEPQQEQQQEFQQQLQHQQGKSPSNYTNISSLTTLVTNKLNCVNNEINNIQQQLTRIKKGKAKAQKAALKAKLEKLNRKKTEFERQLNCKPKTSNQHERTGRQSNVKRNSELDQPTCKPNTSNEHTKTGQQSEANRNSLYEQDTKDVSPASSLDNIPNIHDAMTKAERKAVDWFEMTTSPSTSATSLTASTSSYTTRATGEPASILQEPSATTDPQEPTSVNSTTSSHRHNTDEQVSIRVKPITVSNNGQRKEASILSKKDNIEFRLNEVKKLLGSLQQVNTNLLNEDQTFCHNEALRLCIEQIHSLATEVNDQSVSSSERSDNVQQIQHSRDIQATSREKRPKVDKLREVSDITISTSTTATSCKPGVNRCFIYAAEAALMTIGKYFTQETLNDLYKLADKGQHDASEVVARSGIPTIQTAKCILHGTCELTSPCCSNVVPNTTATHILIKQHLGEASSYGLVVIQPLAYLHHTGNALNGHWKCSYNTPQGTRKMKDSGVTSNINKHPKATWTLCKVMLNTNLELANGDVVGKTNITIISQNINLVASLLTAHGDPVHHDATTLAIVRGNDAITVVTPEAVDYKTLTPKSTVYCLEYEPAVSKKLHATKCQLHEPQAPASSFALDSKNKDANIKAMQRNLRQYLTKYYSTNLTTQGPIKTLVVGIGKGNDIPHYAAANNGNGIVYDGCDISNEALNICATKVPSTTTLYQSDVNTKQFDKLCKNYDLLVSTFSWHFKDQVKCGKHHEFHVMPIYNPDTYDTWSKYYDVTVHAKDEASITHTINMPTCRTIETLHTTEWWYGQYCSNVIIKSLQTELNSTNKHFSNFIILIHTGHKTSSTSTKKTASTKSTPVSRGSPSSCSSNNSMTSNSNCTETASLANSTSQSTTTTQVTRNQNVKVPQLPADNHDCNTMYPEDADDERTEFEQCLNKSNIPITIHSCNSEDFIDTAYATRPENVNAFFCREFCTNCFVHLPKNAVVDRQLLTNAQVYLKWSGISVNELNYNLISTLHQRQVICLDHLEPAPAATDDNWVIRRTTTKPVKVLYMSHDVFKTIDSTQAAIFHRDFDIFTHQLSRFTKRPVQSVVIHTSSKDEAEAVCNTLEYYNITNIKIAEHRVGKFETLVFDRKTCQYETLHIDKKRAGIWDQIKQHFHDIKKPYLIEWNNITEECSHDDKYKAIASFSDKHGLDSYQRLIGSDKCVFVDYKTGIDTNPDKLDDYYRSRHATETGKEVVYTAVFKLPPTDSNDSRTVFAALAVTKDGKSLYINGDKTSIPATAVNKALYHIMQARYGNNTKVIGEVYSKFFSPEKETTAAYSYKDLFTALPFMLFLLQPGFFTFALSLLAMAFFLFDRKALFNSVTATHQLVTTAIEYETTAAMSYLRLGNYKVTKYMIATANAFICLYLLFCAYWACVSNHDLIDTTQAPYHSYAQRILAFFDYIPSVHDYASAITLKELCGSNIICRLGSPYNKLYLDQYKHYVTNKSYVFRDKLLSLCSFYTPWGLLMCCLDFKPSWHLAIYNLLMTICICYFIFRRFFTCCKASGPFCAKHALLRTNNIQYYCSGKPHNIQAIKVKYCTKHKWWCNTTQEHLLPHPIARVIEASTQMQTNYIKSDNYFRYVSQPADRELPEAFKDYNHNNVYSTNNLSYLEWTQRAALFAHCSSTKVKISSHDSSSITNQKVEMTQAMLDYFKTNEDWRYNYVAAQQAGRKNVLHVGFLENMSEKELSEFYEFCCQYDQSFTKTCIKRDNFLNGKVPDCFKSSRLLSTKYHTDTIYLDSFAVEHHDDIKQQASLNHFLVSQGKPKKYINSKRNIFIALAILVLLALTRVAYRKVVKINTPAGLNPTGKDYAKGTLYLHDSIIATPVAYGNNRKVQAWHFNNGTFAFTEKRSTLTARTSCGDFDNSFLQVETYHQTCDQYWPLAINLFKLSIYWFQADKPYTTRHGDYFSQDGAICFGLSDSLVCHETMSIYTPTAFIWITSSVVFCFIFSIFCYIKIRGYFGNYTSSVLVLMTIHAITVVLYLFVPGLAFVFVIALFFFPAYRLVIGTYSFVVCSMFFGLNLVILFGLYIIVFLVIFWFSRQRTTDVEYTPSGVIFSSNFSGIAKNAFLLTPENVPTILSVTGKNYAHLLEMSTGPQLKPETALANAILKCSITNTKMLYEPPKSTRLPVYLQSKLNRLGDIVINNAQLTNICGIYDGTGVIGHGIFTTPTTVLTARHCYTPTIQVFYRGTLLSVKDHNDTGFNTILIVDKQINIKPLAIDNHHELELGTQYTHVVSPLDDQATVTVHQLYPTPSGHFAHALTIAGESGSPIFYHNKLVGIHQAMVKSKENTGAHAIACRVDGTPFDSSFHDTLMAAGKVQFDGNALLNHYLTNECRKVIPVREFNNQIAEANKLIGNYNHISIINDHALLQAEPRDLTPLIDFLKGSPVIRDYHCKPYKIGNDIKLQNKFSHRLIVYCTLSNMLSLAMTVTYFLTTAIYGTLTIKNFIDLLLAGAMLTVVFRSRHVVFLLTTGAYFVNVIELFMYVCHTNIEVIRNIFSSNDEIYAHVVQTVVRFGLQDIMLCTVILFVMLLKFILLPLRCIIFTIVYWTLVYFFGVINFYTVAVFIFSFANTSSWFTCLTLLLQNTIYFPIWFTLNIVLSMRISWPKWLINRYHQITSDSVRVNRSFFCHHLAVYHKPPSFFEVLISQMFYSQEDVIEYVPQSKIVPYVVVGSATHYPNVNAKSRALMSGSDSDTLYAHFISAVEAVLQSTTAADQQVFMTWCAATCDQETLEKWLEDNPEDTSNKLRTKRRNIIQARIMFLKAKEEKLRKQINLMQLEQVRGMMRSELSIKLCDVLNRSVAEMQEKANMRTKTFGKGIIAASTLTVPEMLVITNTNGRDKISWDDESECFCFEFEEAIYHIAELNTNTGQAIHTETELNSLTATNFPLYGKLQDFNFDGVVNQANIGYSIKPHQIRIIRSSSGIKIEYASSSDKAAKPILEEVQEATDNTVLLVADGVLKPFKVNSHVQAPILAAVMAKLRFDSVDLQSIRLGGLENSTEHVATSNQPLRCRGYTTYFAPSLCRYCRTNIEHKCKYQQFVQIPANEEPDQYLSNHDICQHNKFICNTCHNTASNQQRSTTVKPAEKLRRLREQAKNSSRPQ
Summary
Catalytic Activity
ATP + H2O = ADP + H(+) + phosphate
a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)
a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)
Similarity
Belongs to the coronaviruses polyprotein 1ab family.
Uniprot
Pubmed
EMBL
Proteomes
Pfam
Interpro
IPR032592
NAR_dom
IPR027352 CV_ZBD
IPR014828 NSP7
IPR001205 RNA-dir_pol_C
IPR002705 Pept_C30/C16_B_coronavir
IPR036333 NSP10_sf
IPR009469 RNA_pol_N_coronovir
IPR032505 Corona_NSP4_C
IPR009466 NSP11
IPR042570 NAR_sf
IPR008740 Peptidase_C30
IPR037204 NSP7_sf
IPR007094 RNA-dir_pol_PSvirus
IPR027351 (+)RNA_virus_helicase_core_dom
IPR029063 SAM-dependent_MTases
IPR018995 RNA_synth_NSP10_coronavirus
IPR038083 R1a/1ab
IPR041679 DNA2/NAM7-like_AAA
IPR036499 NSP9_sf
IPR037227 EndoU-like
IPR014829 NSP8
IPR009003 Peptidase_S1_PA
IPR014822 NSP9
IPR013016 Peptidase_C30/C16
IPR014827 Viral_protease
IPR022570 B-CoV_NSP1
IPR027417 P-loop_NTPase
IPR038123 NSP4_C_sf
IPR037230 NSP8_sf
IPR042515 Nsp15_N
IPR009461 Coronavirus_NSP16
IPR002589 Macro_dom
IPR027352 CV_ZBD
IPR014828 NSP7
IPR001205 RNA-dir_pol_C
IPR002705 Pept_C30/C16_B_coronavir
IPR036333 NSP10_sf
IPR009469 RNA_pol_N_coronovir
IPR032505 Corona_NSP4_C
IPR009466 NSP11
IPR042570 NAR_sf
IPR008740 Peptidase_C30
IPR037204 NSP7_sf
IPR007094 RNA-dir_pol_PSvirus
IPR027351 (+)RNA_virus_helicase_core_dom
IPR029063 SAM-dependent_MTases
IPR018995 RNA_synth_NSP10_coronavirus
IPR038083 R1a/1ab
IPR041679 DNA2/NAM7-like_AAA
IPR036499 NSP9_sf
IPR037227 EndoU-like
IPR014829 NSP8
IPR009003 Peptidase_S1_PA
IPR014822 NSP9
IPR013016 Peptidase_C30/C16
IPR014827 Viral_protease
IPR022570 B-CoV_NSP1
IPR027417 P-loop_NTPase
IPR038123 NSP4_C_sf
IPR037230 NSP8_sf
IPR042515 Nsp15_N
IPR009461 Coronavirus_NSP16
IPR002589 Macro_dom
SUPFAM
ProteinModelPortal
Ontologies
KEGG
GO
GO:0033644 C:host cell membrane
GO:0008168 F:methyltransferase activity
GO:0004197 F:cysteine-type endopeptidase activity
GO:0039520 P:induction by virus of host autophagy
GO:0003724 F:RNA helicase activity
GO:0039694 P:viral RNA genome replication
GO:0005524 F:ATP binding
GO:0006351 P:transcription, DNA-templated
GO:0008270 F:zinc ion binding
GO:0019082 P:viral protein processing
GO:0044220 C:host cell perinuclear region of cytoplasm
GO:0016896 F:exoribonuclease activity, producing 5'-phosphomonoesters
GO:0003723 F:RNA binding
GO:0016021 C:integral component of membrane
GO:0008242 F:omega peptidase activity
GO:0003968 F:RNA-directed 5'-3' RNA polymerase activity
GO:0032259 P:methylation
GO:0044165 C:host cell endoplasmic reticulum
GO:0008168 F:methyltransferase activity
GO:0004197 F:cysteine-type endopeptidase activity
GO:0039520 P:induction by virus of host autophagy
GO:0003724 F:RNA helicase activity
GO:0039694 P:viral RNA genome replication
GO:0005524 F:ATP binding
GO:0006351 P:transcription, DNA-templated
GO:0008270 F:zinc ion binding
GO:0019082 P:viral protein processing
GO:0044220 C:host cell perinuclear region of cytoplasm
GO:0016896 F:exoribonuclease activity, producing 5'-phosphomonoesters
GO:0003723 F:RNA binding
GO:0016021 C:integral component of membrane
GO:0008242 F:omega peptidase activity
GO:0003968 F:RNA-directed 5'-3' RNA polymerase activity
GO:0032259 P:methylation
GO:0044165 C:host cell endoplasmic reticulum
Subcellular Location
From MSLVP
Capsid
From Uniprot
Host cytoplasm
Host perinuclear region
Host endoplasmic reticulum
Host membrane
Host perinuclear region
Host endoplasmic reticulum
Host membrane
Topology
Length:
5555
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
283.97816
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00020
outside
1 - 3740
TMhelix
3741 - 3763
inside
3764 - 3803
TMhelix
3804 - 3826
outside
3827 - 3925
TMhelix
3926 - 3945
inside
3946 - 4224
TMhelix
4225 - 4242
outside
4243 - 4385
TMhelix
4386 - 4408
inside
4409 - 4430
TMhelix
4431 - 4453
outside
4454 - 4467
TMhelix
4468 - 4490
inside
4491 - 4865
TMhelix
4866 - 4888
outside
4889 - 4916
TMhelix
4917 - 4939
inside
4940 - 4971
TMhelix
4972 - 4994
outside
4995 - 4997
TMhelix
4998 - 5020
inside
5021 - 5026
TMhelix
5027 - 5049
outside
5050 - 5555
