CoVDB Coronavirus Database (v2) Go to the lastest version >>
Found: 10 items
Strain Gene Type Sub Loc Uniprot Sublocation Topology
Human_2019-nCoV_406799 QHD43415.1 ORF1 Capsid Host membrane
outside 1 - 1628
TMhelix 1629 - 1651
inside 1652 - 1734
TMhelix 1735 - 1757
outside 1758 - 2040
TMhelix 2041 - 2063
inside 2064 - 2074
TMhelix 2075 - 2097
outside 2098 - 2101
TMhelix 2102 - 2124
inside 2125 - 2132
TMhelix 2133 - 2155
outside 2156 - 4439
Human_2019-nCoV_406799 QHD43416.1 S Host nucleus > host nucleolus. Host cytoplasm. Secreted. Host cell membrane
Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion.
referred by 1 publications
outside 1 - 156
Human_2019-nCoV_406799 QHD43417.1 Host nucleus > host nucleolus. Host cytoplasm. Secreted.

outside 1 - 33
TMhelix 34 - 56
inside 57 - 76
TMhelix 77 - 99
outside 100 - 102
TMhelix 103 - 125
inside 126 - 259
Human_2019-nCoV_406799 QHD43418.1 E Host nucleus. Host cytoplasm. Host Golgi apparatus membrane
The cytoplasmic tail functions as a Golgi complex-targeting signal.
referred by 1 publications
inside 1 - 11
TMhelix 12 - 34
outside 35 - 75
Human_2019-nCoV_406799 QHD43419.1 M Host nucleus. Host cytoplasm.

outside 1 - 19
TMhelix 20 - 39
inside 40 - 50
TMhelix 51 - 73
outside 74 - 77
TMhelix 78 - 100
inside 101 - 222
Human_2019-nCoV_406799 QHD43420.1 Host nucleus. Host cytoplasm.

outside 1 - 61
Human_2019-nCoV_406799 QHD43421.1 Host nucleus > host nucleolus. Host cytoplasm. Secreted.

outside 1 - 96
TMhelix 97 - 116
inside 117 - 121
Human_2019-nCoV_406799 QHD43422.1 Host nucleus. Host cytoplasm.

outside 1 - 121
Human_2019-nCoV_406799 QHD43423.2 N Host nucleus > host nucleolus. Host cytoplasm. Secreted. Host Golgi apparatus
Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding.
referred by 1 publications
outside 1 - 374
Human_2019-nCoV_406799 QHI42199.1 Single-Pass Membrane

inside 1 - 39
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