Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Human_2019-nCoV_406799 | QHD43415.1 | ORF1 | Capsid |
Host membrane |
outside 1 - 1628 TMhelix 1629 - 1651 inside 1652 - 1734 TMhelix 1735 - 1757 outside 1758 - 2040 TMhelix 2041 - 2063 inside 2064 - 2074 TMhelix 2075 - 2097 outside 2098 - 2101 TMhelix 2102 - 2124 inside 2125 - 2132 TMhelix 2133 - 2155 outside 2156 - 4439 |
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Human_2019-nCoV_406799 | QHD43416.1 | S | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 156 |
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Human_2019-nCoV_406799 | QHD43417.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 76 TMhelix 77 - 99 outside 100 - 102 TMhelix 103 - 125 inside 126 - 259 |
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|
Human_2019-nCoV_406799 | QHD43418.1 | E | Host nucleus. Host cytoplasm. |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
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Human_2019-nCoV_406799 | QHD43419.1 | M | Host nucleus. Host cytoplasm. |
|
outside 1 - 19 TMhelix 20 - 39 inside 40 - 50 TMhelix 51 - 73 outside 74 - 77 TMhelix 78 - 100 inside 101 - 222 |
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Human_2019-nCoV_406799 | QHD43420.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 61 |
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|
Human_2019-nCoV_406799 | QHD43421.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
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|
Human_2019-nCoV_406799 | QHD43422.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 121 |
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Human_2019-nCoV_406799 | QHD43423.2 | N | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host Golgi apparatus Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 374 |
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Human_2019-nCoV_406799 | QHI42199.1 | Single-Pass Membrane |
|
inside 1 - 39 |
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