Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Human_2019-nCoV_408978 | QHD43415.1 | ORF1 | Capsid |
Host membrane |
outside 1 - 2892 TMhelix 2893 - 2915 inside 2916 - 2935 TMhelix 2936 - 2958 outside 2959 - 3378 TMhelix 3379 - 3396 inside 3397 - 3416 TMhelix 3417 - 3436 outside 3437 - 3465 TMhelix 3466 - 3488 inside 3489 - 3499 TMhelix 3500 - 3522 outside 3523 - 6803 |
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Human_2019-nCoV_408978 | QHD43416.1 | S | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1213 TMhelix 1214 - 1236 inside 1237 - 1273 |
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Human_2019-nCoV_408978 | QHD43417.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 275 |
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|
Human_2019-nCoV_408978 | QHD43418.1 | E | Host nucleus. Host cytoplasm. |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
outside 1 - 25 |
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Human_2019-nCoV_408978 | QHD43419.1 | M | Host nucleus. Host cytoplasm. |
|
outside 1 - 19 TMhelix 20 - 39 inside 40 - 45 TMhelix 46 - 68 outside 69 - 77 TMhelix 78 - 100 inside 101 - 222 |
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Human_2019-nCoV_408978 | QHD43420.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 61 |
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|
Human_2019-nCoV_408978 | QHD43421.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
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|
Human_2019-nCoV_408978 | QHD43422.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 121 |
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|
Human_2019-nCoV_408978 | QHD43423.2 | N | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host Golgi apparatus Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 363 |
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Human_2019-nCoV_408978 | QHI42199.1 | Single-Pass Membrane |
|
outside 1 - 38 |
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