Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Pgo_410544 | QHD43415.1 | ORF1 | Capsid |
Host membrane |
outside 1 - 1029 TMhelix 1030 - 1052 inside 1053 - 1388 TMhelix 1389 - 1408 outside 1409 - 1417 TMhelix 1418 - 1440 inside 1441 - 1452 TMhelix 1453 - 1475 outside 1476 - 4164 |
|
Pgo_410544 | QHD43416.1 | S | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 670 |
|
Pgo_410544 | QHD43417.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 67 TMhelix 68 - 90 outside 91 - 93 TMhelix 94 - 116 inside 117 - 275 |
||
Pgo_410544 | QHD43418.1 | E | Host nucleus. Host cytoplasm. |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
outside 1 - 14 TMhelix 15 - 37 inside 38 - 72 |
|
Pgo_410544 | QHD43419.1 | M | Host nucleus. Host cytoplasm. |
|
outside 1 - 69 |
|
Pgo_410544 | QHD43420.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 23 |
||
Pgo_410544 | QHD43421.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 55 |
||
Pgo_410544 | QHD43422.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 55 |
||
Pgo_410544 | QHD43423.2 | N | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host Golgi apparatus Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 419 |
|
Pgo_410544 | QHI42199.1 | Single-Pass Membrane |
|
outside 1 - 38 |
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