Strain
Cow_AB354579
(Region: Japan; Strain: Bovine coronavirus genomic RNA, complete genome, strain: Kakegawa.; Date: 1980)
Gene
32 kDa protein
Description
Annotated in NCBI,
32 kDa protein
Location
GenBank Accession
Sequence
CDS
ATGGCAGTTGCTTATGCAGACAAGCCTAATCACTTTATTAATTTTCCACTTACCCAGTTTGAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTTCAACTTCTCGATGAAGGAGTGGATTGTAAAACACAAACAGCGCCGCACATTAGTCTTGCTATGCTGGATATTCAGCCTGAAGACTATAGAAGTGTTGATGTTGCTATTCAAGAAGTTATTGATGACATGCATTGGGGTGAGGGCTTTCAGATTAAATTTGATAACCCCCATATCCTAGGAAGATGCATAGTTTTAGATGTTAAAGGTGTAGAAGAATTGCATGATGATTTAGTTAATTACATTCGTGATAAAGGTTGTGTTGCTGACCAATCCAGGAAATGGATTGGACATTGCACCATAGCCCAACTCACGGATGCTGCACTTTCCATTAAGGAAAATGTTGATTTCATAAACAGCATGCAATTCAATTATAAAATCACTATCAACCCCTCATCACCGGCTAGACTTGAAATAGTTAAGCTTGGTGCTGAAAAGAAAGATGGTTTTTATGAAACCATAGTTAGCCACTGGATGGGAATTCGTTTTGAATATAATCCACCCACTGATAAGCTAGCTATGATTATGGGTTATTGTTGTTTAGAAGTGGTGCGTAAAGAGCTAGAAGAAGGTGATCTTCCCGAGAATGATGATGATGCTTGGTTTAAGCTATCGTACCATTATGAAAACAATTCTTGGTTCTTTCGACATGTCTACAGGAAAAGTTCTTATTTCCGTAAGTCTTGTCAAAATTTAGATTGTAATTGTTTGGGGTTTTATGAATCTCCAGTTGAAGAAGACTAA
Protein
MAVAYADKPNHFINFPLTQFEGFVLNYKGLQFQLLDEGVDCKTQTAPHISLAMLDIQPEDYRSVDVAIQEVIDDMHWGEGFQIKFDNPHILGRCIVLDVKGVEELHDDLVNYIRDKGCVADQSRKWIGHCTIAQLTDAALSIKENVDFINSMQFNYKITINPSSPARLEIVKLGAEKKDGFYETIVSHWMGIRFEYNPPTDKLAMIMGYCCLEVVRKELEEGDLPENDDDAWFKLSYHYENNSWFFRHVYRKSSYFRKSCQNLDCNCLGFYESPVEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=7e-68 Score= 209 Identity=52.24%
Cov(Q)=72.30% Cov(P)=96.63%
3D Structure
Ontologies
KEGG
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
278
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01922
Exp number, first 60 AAs:
0.01887
Total prob of N-in:
0.06539
outside
1 - 278
