CoVDB Coronavirus Database (v3)   
Strain
Human_SARS_AY274119 (Region: Canada: Toronto;  Strain: Severe acute respiratory syndrome-related coronavirus isolate Tor2, complete genome.;  Date: 2003)
Gene
Orf4
Description
Annotated in NCBI,  Orf4
GenBank Accession
 

Sequence

CDS
ATGATGCCAACTACTTTGTTTGCTGGCACACACATAACTATGACTACTGTATACCATATAACAGTGTCACAGATACAATTGTCGTTACTGAAGGTGACGGCATTTCAACACCAAAACTCAAAGAAGACTACCAAATTGGTGGTTATTCTGAGGATAGGCACTCAGGTGTTAAAGACTATGTCGTTGTACATGGCTATTTCACCGAAGTTTACTACCAGCTTGAGTCTACACAAATTACTACAGACACTGGTATTGAAAATGCTACATTCTTCATCTTTAACAAGCTTGTTAAAGACCCACCGAATGTGCAAATACACACAATCGACGGCTCTTCAGGAGTTGCTAATCCAGCAATGGATCCAATTTATGATGAGCCGACGACGACTACTAGCGTGCCTTTGTAAGCACAAGAAAGTGAGTACGAACTTATGTACTCATTCGTTTCGGAAGAAACAGGTACGTTAA
Protein
MMPTTLFAGTHITMTTVYHITVSQIQLSLLKVTAFQHQNSKKTTKLVVILRIGTQVLKTMSLYMAISPKFTTSLSLHKLLQTLVLKMLHSSSLTSLLKTHRMCKYTQSTALQELLIQQWIQFMMSRRRLLACLCKHKKVSTNLCTHSFRKKQVR

Summary

Uniprot
Pfam
PF12383   SARS_3b
Interpro
IPR022117   SARS_3b
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
154
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.90704
Exp number, first 60 AAs:
4.74299
Total prob of N-in:
0.18202
outside
1  -  154
 
 
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