CoVDB Coronavirus Database (v3)   
Strain
Human_SARS_AY278489 (Region: ;  Strain: SARS coronavirus GD01, complete genome.;  Date: 2003)
Gene
BGI-PUP2
Description
Annotated in NCBI,  BGI-PUP2
GenBank Accession
 

Sequence

CDS
ATGATGCCAACTACTTTGTTTGCTGGCACACACATAACTATGACTACTGTATACCATATAACAGTGTCACAGATACAATTGTCGTTACTGCAGGTGACGGCATTTCAACACCAAAACTCAAAGAAGACTACCAAATTGGTGGTTATTCTGAGGATTGGCACTCAGGTGTTAAAGACTATGTCGTTGTACATGGCTATTTCACCGAAGTTTACTACCAGCTTGAGTCTACACAAATTACTACAGACACTGGTATTGAAAATGCTACATTCTTCATCTTTAACAAGCTTGTTAAAGACCCACCGAATGTGCAAATACACACAATCGACGGCTCTTCAGGAGTTGCAAATCCAGCAATGGATCCAATTTATGATGAGCCGACGACGACTACTAGCGTGCCTTTGTAAGCACAAGAAAGTGAGTACGAACTTATGTACTCATTCGTTTCGGAAGAAACAGGTACGTTAA
Protein
MMPTTLFAGTHITMTTVYHITVSQIQLSLLQVTAFQHQNSKKTTKLVVILRIGTQVLKTMSLYMAISPKFTTSLSLHKLLQTLVLKMLHSSSLTSLLKTHRMCKYTQSTALQELQIQQWIQFMMSRRRLLACLCKHKKVSTNLCTHSFRKKQVR

Summary

Uniprot
Pfam
PF12383   SARS_3b
Interpro
IPR022117   SARS_3b
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
154
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.31658999999999
Exp number, first 60 AAs:
4.23988
Total prob of N-in:
0.17733
outside
1  -  154
 
 
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