CoVDB Coronavirus Database (v3)   
Strain
Human_SARS_AY502926 (Region: Taiwan;  Strain: SARS coronavirus TW3, complete genome.;  Date: 2003)
Gene
unknown
Description
Annotated in NCBI,  unknown
GenBank Accession
 

Sequence

CDS
ATGGACCCCAATCAAACCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCACAGATTCAACTGACAATAACCAGAATGGAGGACGCAATGGGGCAAGGCCAAAACAGCGCCGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPNQTNVVPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK

Summary

Pfam
PF09399   SARS_lipid_bind
Interpro
IPR018542   SARS_lipid-bd
IPR037223   SARS_ORF-9b
SUPFAM
SSF141666   SSF141666
ProteinModelPortal
PDB
2CME     E-value=3e-48     Score= 147     Identity=86.67%     Cov(Q)=91.84%     Cov(P)=113.92%

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
98
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00321
Exp number, first 60 AAs:
0.00294
Total prob of N-in:
0.29037
outside
1  -  98
 
 
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