Strain
Feline_AY572035
(Region: China: Southern China; Strain: SARS coronavirus civet010, complete genome.; Date: 02/01/2004)
Gene
orf12
Description
Annotated in NCBI,
orf12
Location
GenBank Accession
Sequence
CDS
ATGGACCCCAATCAAACCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCACAGATTCAACTGACAACAACCAGAATGGAGGACGCAATGGGGCAAGGCCAAAACAGCGCCGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPNQTNVVPPALHLVDPQIQLTTTRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK
Summary
Uniprot
EMBL
Pfam
PF09399
SARS_lipid_bind
SUPFAM
SSF141666
SSF141666
ProteinModelPortal
PDB
2CME
E-value=2e-47 Score= 146 Identity=85.56%
Cov(Q)=91.84% Cov(P)=113.92%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
98
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00269
Exp number, first 60 AAs:
0.00242
Total prob of N-in:
0.29036
outside
1 - 98
