Strain
Murine_AY700211
(Region: ; Strain: Murine hepatitis virus strain A59, complete genome.; Date: )
Gene
nonstructural protein 2a
Description
Annotated in NCBI,
nonstructural protein 2a
Location
GenBank Accession
Full name
Non-structural protein 2a
Alternative Name
ns2
Sequence
CDS
ATGGCCTTTGCTGACAAGCCTAATCATTTCATAAACTTTCCCCTGGCCCAATTTAGTGGCTTTATGGGTAAGTATTTAAAGCTACAGTCTCAACTTGTGGAAATGGGTTTAGACTGTAAATTACAGAAGGCACCACATGTTAGTATTACCCTGCTTGATATTAAAGCAGACCAATACAAACAGGTGGAATTTGCAATACAAGAAATAATAGATGATCTGGCGGCATATGAGGGAGATATTGTCTTTGACAACCCTCACATGCTTGGCAGATGCCTTGTTCTTGATGTTAGAGGATTTGAAGAGTTGCATGAAGATATTGTTGAAATTCTCCGCAGAAGGGGTTGCACGGCAGATCAATCCAGACACTGGATTCCGCACTGCACTGTGGCCCAATTTGACGAAGAAAGAGAAACAAAAGGAATGCAATTCTATCATAAAGAACCCTTCTACCTCAAGCATAACAACCTATTAACGGATGCTGGGCTTGAGCTCGTGAAGATAGGTTCTTCCAAAATAGATGGGTTTTATTGTAGTGAACTGAGTGTTTGGTGTGGTGAGAGGCTTTGTTATAAGCCTCCAACACCCAAATTCAGTGATATATTTGGCTATTGCTGCATAGATAAAATACGTGGTGATTTAGAAATAGGAGACCTACCGCAGGATGATGAGGAAGCGTGGGCCGAGCTAAGTTACCACTATCAAAGAAACACCTACTTCTTCAGACATGTGCACGATAATAGCATCTATTTTCGTACCGTGTGTAGAATGAAGGGTTGTATGTGTTGA
Protein
MAFADKPNHFINFPLAQFSGFMGKYLKLQSQLVEMGLDCKLQKAPHVSITLLDIKADQYKQVEFAIQEIIDDLAAYEGDIVFDNPHMLGRCLVLDVRGFEELHEDIVEILRRRGCTADQSRHWIPHCTVAQFDEERETKGMQFYHKEPFYLKHNNLLTDAGLELVKIGSSKIDGFYCSELSVWCGERLCYKPPTPKFSDIFGYCCIDKIRGDLEIGDLPQDDEEAWAELSYHYQRNTYFFRHVHDNSIYFRTVCRMKGCMC
Summary
Similarity
Belongs to the coronaviruses ns2a protein family.
Uniprot
Pubmed
EMBL
Pfam
PF05213
Corona_NS2A
ProteinModelPortal
PDB
4Z5V
E-value=3e-148 Score= 412 Identity=99.00%
Cov(Q)=77.01% Cov(P)=96.63%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
261
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01913
Exp number, first 60 AAs:
0.01913
Total prob of N-in:
0.04050
outside
1 - 261
