Strain
Porcine_DQ011855
(Region: Belgium; Strain: Porcine hemagglutinating encephalomyelitis virus strain VW572, complete genome.; Date: )
Gene
non-structural protein
Description
Annotated in NCBI,
non-structural protein
Location
GenBank Accession
Sequence
CDS
ATGGACATCTGGTGCCCTGAAAAGAAATATCTCCGTTATACTAACGGATTTAACGTCTCAGTACTAGAAGATGTCTGTTTTAAATATAACTATCAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAATTATGCTTGGTGCCGTAACCAAGGTAGTTTTTGTGCTACATTTACTTTATACGGCAAATCCAAACATTATGATAAATATTTTGGAATAATAACTGGTTTTACAGCATTCTCTAATTCTGTAGAAGAAGCTGTTAATAAACTGGTTTTTTTAGCTGTTGACTTCATTACCTGGCGAAGCCAGAGTTTAAATGTTTATGGCTGA
Protein
MDIWCPEKKYLRYTNGFNVSVLEDVCFKYNYQFPKVGYCRVPNYAWCRNQGSFCATFTLYGKSKHYDKYFGIITGFTAFSNSVEEAVNKLVFLAVDFITWRSQSLNVYG
Summary
Uniprot
Proteomes
Pfam
PF04753
Corona_NS2
Interpro
IPR006841
Corona_NS2
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33613
Exp number, first 60 AAs:
0.01741
Total prob of N-in:
0.42242
outside
1 - 109
