Strain
Bat_DQ084199
(Region: China: Hong Kong; Strain: bat SARS coronavirus HKU3-2, complete genome.; Date: 24/02/2005)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTCTTCTTGACATTGATAGCGCTTGCAACTTGTGAGTTATATCATTATCGGGAGTGTGTTAGGGGTACGACTGTACTACTAAAAGAACCTTGCCCATCAGGAACATATGAGGGCAATTCACCATTTCACCCTCTTGCTGATAATAAATTTGCACTAACTTGCTCTAGCACACATTTTGCTTTTGCTTGTGCTGACGGTACTAGACACACCTATCAGCTTCGTGCAAGATCAGTTTCACCAAAACTTTTCATCAGACAAGAGGAAGTTTATCAAGAGCTCTACTCACCACTTTTCCTCATTGTTGCTGCATTAGTATTTATAATACTTTGCTTCACCATTAAGAGAAAGACAGAATGA
Protein
MKIILFLTLIALATCELYHYRECVRGTTVLLKEPCPSGTYEGNSPFHPLADNKFALTCSSTHFAFACADGTRHTYQLRARSVSPKLFIRQEEVYQELYSPLFLIVAALVFIILCFTIKRKTE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=3e-57 Score= 172 Identity=96.43%
Cov(Q)=68.85% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.97628
Exp number, first 60 AAs:
0.87927
Total prob of N-in:
0.07198
outside
1 - 92
TMhelix
93 - 115
inside
116 - 122
