Strain
Bat_DQ084199
(Region: China: Hong Kong; Strain: bat SARS coronavirus HKU3-2, complete genome.; Date: 24/02/2005)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGGACCCCAAAGTCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCGCAGATTCAAATGACAATAACCAGGATGGAGGACGCAGTGGTGCACGGCCAAAACAACGCCGGCCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAAGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTAAAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPKVNVVPPALHLVDPQIQMTITRMEDAVVHGQNNAGPKVYPIILRLGSQLSLSMAKRNLDSLEARAFQSTPIVVKMTKLATTEELPDEFVVVTAK
Summary
Uniprot
EMBL
Pfam
PF09399
SARS_lipid_bind
SUPFAM
SSF141666
SSF141666
ProteinModelPortal
PDB
2CME
E-value=8e-46 Score= 142 Identity=82.22%
Cov(Q)=92.78% Cov(P)=113.92%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00443
Exp number, first 60 AAs:
0.00442
Total prob of N-in:
0.14409
outside
1 - 97
