Strain
Bat_DQ084200
(Region: China: Hong Kong; Strain: bat SARS coronavirus HKU3-3, complete genome.; Date: 17/03/2005)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGGACCCCAAAGTCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCGCAGATTCAAATGACAATAACCAGGATGGAGGACGCAGTGGTGCACGACCAAAACAACGCCGGCCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAAGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTAAAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPKVNVVPPALHLVDPQIQMTITRMEDAVVHDQNNAGPKVYPIILRLGSQLSLSMAKRNLDSLEARAFQSTPIVVKMTKLATTEELPDEFVVVTAK
Summary
Uniprot
EMBL
Pfam
PF09399
SARS_lipid_bind
SUPFAM
SSF141666
SSF141666
ProteinModelPortal
PDB
2CME
E-value=1e-45 Score= 141 Identity=82.22%
Cov(Q)=92.78% Cov(P)=113.92%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00276
Exp number, first 60 AAs:
0.00275
Total prob of N-in:
0.14407
outside
1 - 97
