CoVDB Coronavirus Database (v3)   
Strain
Bat_DQ339101 (Region: Hong Kong;  Strain: Human coronavirus HKU1 strain N5P8 genotype A/B recombinant, complete genome.;  Date: 2003)
Gene
unknown
Description
Annotated in NCBI,  unknown
GenBank Accession
 

Sequence

CDS
ATGGAAGTTTGGAGGCCTAGCTATAAATATTCTCTTATTACTAGAGAATTTGGTGTCACAGATCTTGAGGATTTGTGTTTTAAATATAATTATTGCCAACCTTGTGTTGGTTATTGTATTGTACCTTTAAACGTTTGGTGTCGTAAGTTTGGTAAATTTGCTTCTTATTTTGTTTTACGTAGTCATGACACCTCTCATAAGAATAATTTTGGTGTTATAACTAGTTTTACTAGTTATGGTAACACTGTTTCTGAGGCTGTTTCTAAATTAGTTGAATCAGCATCTGATTTTATCGCTTGGCGAGCTGAAGCACTTAATAAGTATGGTTGA
Protein
MEVWRPSYKYSLITREFGVTDLEDLCFKYNYCQPCVGYCIVPLNVWCRKFGKFASYFVLRSHDTSHKNNFGVITSFTSYGNTVSEAVSKLVESASDFIAWRAEALNKYG

Summary

Uniprot
Pfam
PF04753   Corona_NS2
Interpro
IPR006841   Corona_NS2
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21995
Exp number, first 60 AAs:
0.20079
Total prob of N-in:
0.41829
outside
1  -  109
 
 
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