CoVDB Coronavirus Database (v3)   
Strain
Bat_DQ648857 (Region: China: Hubei;  Strain: Bat coronavirus (BtCoV/279/2005), complete genome.;  Date: 2004)
Gene
putative ORF6
Description
Annotated in NCBI,  putative ORF6
Location
DQ648857(+):27050-27241
GenBank Accession
ABG47073.1
 

Sequence

CDS
ATGTTTCATCTTGTTGACTTCCAGGTTACAATAGCAGAGATATTGATTATCATTATGAAGACTTTCAGGGTTGCCATTTGGAACCTTGACATACTAATAAGTTCAATAGTGAGACAATTATTTAAGCCTCTAACTAAGAAGAAATACTCTGAGTTAGATGATGAAGAACCTATGGAGTTAGATTATCCATAA
Protein
MFHLVDFQVTIAEILIIIMKTFRVAIWNLDILISSIVRQLFKPLTKKKYSELDDEEPMELDYP

Summary

Uniprot
A0A2R3SUW5  
EMBL
MG772933    MG772934    AVP78035.1    AVP78046.1   
Pfam
PF12133   Sars6
Interpro
IPR022736   SARS_NS6
ProteinModelPortal
A0A2R3SUW5  

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
63
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
14.66636
Exp number, first 60 AAs:
14.66636
Total prob of N-in:
0.13422
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  37
inside
38  -  63
 
 
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