Strain
Whale_EU111742
(Region: USA; Strain: Coronavirus SW1, complete genome.; Date: 2008)
Gene
ORF 5b
Description
Annotated in NCBI,
ORF 5b
Location
GenBank Accession
Sequence
CDS
ATGGGTAATTTTCTTTCTAATATATTTACGGTACAGGTTAGCACCAACCATAATGCTCATGTTGTGAGCGCTGGTCATGATGCTAGCTTAGCAGCTTCTGCTAGTAATATGCAAATGCACTTTTCTGTTACGCTAGTTATTACTAGCATGTTGATGTTTGTGATTATTATTGTTATGTTTTTGATGCTATGTAGTATACGTAGACATTTAATGCCTAATAGAGGGCGATCGCTTATAGGACGTGCCACTCGTGCTATAAGGCGTACTTTTAAGAGCAGAAAAGGAGGGGGCAAAGATATGGAAGAGCTTCAGCCTCTAAATAATCAAATCAAGCACTCCTCAGTTGAATTTAAAAAGAATTTGCTCACTATGATTAATGAGGTGGATAAAATTGAAGCCTCTAGAAAGGAAGAGCCATTTTACGAGGAAATTAAACTTAAGCCGAGTACTAAGAAGTACCGTGCACCTCAGCCTCCTAAGATAAGCTCTACACCTATTTATATTAATCATGTTGGGTAG
Protein
MGNFLSNIFTVQVSTNHNAHVVSAGHDASLAASASNMQMHFSVTLVITSMLMFVIIIVMFLMLCSIRRHLMPNRGRSLIGRATRAIRRTFKSRKGGGKDMEELQPLNNQIKHSSVEFKKNLLTMINEVDKIEASRKEEPFYEEIKLKPSTKKYRAPQPPKISSTPIYINHVG
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
172
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.77169
Exp number, first 60 AAs:
18.28323
Total prob of N-in:
0.12033
POSSIBLE N-term signal
sequence
outside
1 - 43
TMhelix
44 - 66
inside
67 - 172
