CoVDB Coronavirus Database (v3)   
Strain
Whale_EU111742 (Region: USA;  Strain: Coronavirus SW1, complete genome.;  Date: 2008)
Gene
ORF 10
Description
Annotated in NCBI,  ORF 10
GenBank Accession
 

Sequence

CDS
ATGAAACCCTATATTATTGGGATTTCCGGGATTAGTGGATCTGGTAAATCAACTTTTGCAGCCAATTTGAAAACTAAGTGTGGAGATTTTTACGCTGGGGATGTTGTGATTATTAATTTAGATGGGTTTTATCGCAGCATTAATGAGGACGATATGTGCCTTGTTAAAGCTGGTGAGTATAATTTTGATCATCCCTATGCAATAGATTTAGATCATGCACGTAGGTGTATTTCAGCTATAGCTGATGGCCACCTTGTTGCAGTTCCTATTTATGATTTTGAGAAAAAGAAATGTGTTGGGCACTATGAGGTGAACAACCCTAGAGTAGTGATTGTGGAGGGAATACATGCACTCCACCCCAAGCTTTTTCCATTGTATGATATTACAGCATTTCTAGAGGTACCGATGAGTGTGGCACTTTCTAGACGTGCTGTTAGAGATAATAAAGAAAGAGGTAGAACACCAGAGGATACAGCAGAGATGTTCCGCAAATTTGTTCTCCCCATGTATAAATTACATGTTGAACCCAATGTTAAGAAGGCGGCCATTCTTGTGAATGGACTAAACACTGGTGTTCATATTAATATGCTCTATGAGCACATTAAGCCCCTATTGATTTATCCACGCTTTTAA
Protein
MKPYIIGISGISGSGKSTFAANLKTKCGDFYAGDVVIINLDGFYRSINEDDMCLVKAGEYNFDHPYAIDLDHARRCISAIADGHLVAVPIYDFEKKKCVGHYEVNNPRVVIVEGIHALHPKLFPLYDITAFLEVPMSVALSRRAVRDNKERGRTPEDTAEMFRKFVLPMYKLHVEPNVKKAAILVNGLNTGVHINMLYEHIKPLLIYPRF

Summary

Uniprot
Pfam
PF00485   PRK
Interpro
IPR006083   PRK/URK
IPR027417   P-loop_NTPase
SUPFAM
SSF52540   SSF52540
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
210
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18377
Exp number, first 60 AAs:
0.04817
Total prob of N-in:
0.03972
outside
1  -  210
 
 
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