CoVDB Coronavirus Database (v3)   
Strain
Avian_FJ376619 (Region: Hong Kong;  Strain: Bulbul coronavirus HKU11-934;  Date: 7-Jan)
Gene
nonstructural protein
Description
Annotated in NCBI,  nonstructural protein
Location
FJ376619(+):25732-25986
GenBank Accession
ACJ12041.1
 

Sequence

CDS
ATGGGTACTAGTCAGTCTACTACCAATGTAAATAACCAAATTACAAACATACAAGCTGCTCATGGATCCTCTGTCCAAACATATAACCAAAATAAATCACACATAGAAGTGCTATTGCAGCAGGGAATGCCATTTATAGCACTAACACTTCTAATATTGTGTTTGGTTCAATCTGTCTGGTTGTGTTATTGTTGTCGTCGCAATAAGACACTCAATTCCAGACTTAGAGCAGTTCAACCAAGATTGTTGCCATGA
Protein
MGTSQSTTNVNNQITNIQAAHGSSVQTYNQNKSHIEVLLQQGMPFIALTLLILCLVQSVWLCYCCRRNKTLNSRLRAVQPRLLP

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

Subcellular Location

From MSLVP

Topology

Length:
84
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.1376
Exp number, first 60 AAs:
18.56154
Total prob of N-in:
0.00532
POSSIBLE N-term signal
sequence
outside
1  -  41
TMhelix
42  -  64
inside
65  -  84
 
 
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