Strain
Avian_FJ376620
(Region: Hong Kong; Strain: Bulbul coronavirus HKU11-796, complete genome.; Date: 7-Jan)
Gene
nonstructural protein
Description
Annotated in NCBI,
nonstructural protein
Location
GenBank Accession
Sequence
CDS
ATGATTAGCATTGGTTATTATCTAATAACCTTCTTCACTATGCTATTCTGGCGTATTAAAAACCCTCGTATTGCAGAATTTCTAGGGCCTTTATTGGACCTTGAAATTCTTGGGTTTTTAACACTTGTGTTCTACTACTGGAATTTTCGTCCTCGAAGGTTTCAGCAAATTATAAAGCCAGAGAGCCAGTCAGAGGGCGCTACCATGCAAACTAGGGCTGGCTACTCTTGCACAGAATCACCTTTCTATAATAACCAGTGCAAGAAGGGTTATTATACCATTTAA
Protein
MISIGYYLITFFTMLFWRIKNPRIAEFLGPLLDLEILGFLTLVFYYWNFRPRRFQQIIKPESQSEGATMQTRAGYSCTESPFYNNQCKKGYYTI
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
KEGG
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
94
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
36.83128
Exp number, first 60 AAs:
36.83128
Total prob of N-in:
0.89302
POSSIBLE N-term signal
sequence
inside
1 - 1
TMhelix
2 - 19
outside
20 - 23
TMhelix
24 - 46
inside
47 - 94
