Strain

Deer_FJ425188 (Region: USA: Ohio; Strain: Sambar deer coronavirus US/OH-WD388-TC/1994, complete genome.; Date: 1-Jan-94)

Gene

12.7 kDa non-structural protein

Description

Annotated in NCBI, 12.7 kDa non-structural protein

Location

FJ425188(+):28090-28419

GenBank Accession

ACJ66987.1

Sequence

CDS

ATGGACATCTGGAAACCTGAGATTAAATATCTCCGTTATACTAACGGTTTTAATGTCTCAGAATTAGAAGATGCTTGTTTTAAATTTAACTATAAATTTCCTAAAGTAGGATATTGTAGAGTTCCTAGTCATGCTTGGTGCCGTAATCAAGGTAGCTTTTGTGCTACACTCACTCTTTATGGCAAATCCAAACATTATGATAAATATTTTGGAGTAATAACTGGTTTTACAGCATTCGCTAATACTGTAGAGGAGGCTGTCAACAAACTGGTTTTCTTAGCTGTTGACTTTATTACCTGGCGTAGACAGGAGTTAAATGTTTATGGCTGA

Protein

MDIWKPEIKYLRYTNGFNVSELEDACFKFNYKFPKVGYCRVPSHAWCRNQGSFCATLTLYGKSKHYDKYFGVITGFTAFANTVEEAVNKLVFLAVDFITWRRQELNVYG

Summary

Uniprot

A0A3G3NH38

EMBL

MH687969 MH687971 MH687972 MH687973 MH687974 MH687975 + More
MH687976 MH687977 MH687978 AYR18609.1 AYR18627.1 AYR18636.1 AYR18645.1 AYR18654.1 AYR18663.1 AYR18672.1 AYR18681.1 AYR18690.1

Pfam

PF04753 Corona_NS2

Interpro

IPR006841 Corona_NS2

ProteinModelPortal

A0A3G3NH38

Ontologies

Subcellular Location

From MSLVP

Host nucleus > host nucleolus. Host cytoplasm. Secreted.

Topology

Length:

109

Number of predicted TMHs:

Exp number of AAs in TMHs:

1.06521

Exp number, first 60 AAs:

0.0026

Total prob of N-in:

0.35588

outside

1 - 109