Strain
Murine_FJ647221
(Region: USA: Pennsylvania; Strain: Murine coronavirus repA59/RJHM, complete genome.; Date: presumed 1999)
Gene
non-structural protein ns4
Description
Annotated in NCBI,
non-structural protein ns4
Location
GenBank Accession
Sequence
CDS
ATGGCCCTCATCGGTCCCAAGACTACTATTGCTGCTGTCTTTATTGGTCCATTTCTAGTAGCATGTATGCTAGGCATTGGCCTAGTTTATTTATTGCAATTGCAAGTTCAAATTTTTCATGTTAAGGATACCATACGCGTGACTGGCAAGCCAGCCACTGTGTCTTATACTACAAGTACACCAGTAACGCCGGTTGCAACTACGCTCGACGGTACTACGTATACTTTAATTAGACCCACCAGCTCTTATACAAGAGTCTACCTTGGTAGTTCAAGAGGTTTTGATACTAGTACATTTGGTCCTAAGACTCTAGATTATATTACTAGTTCTAAACCTCATCTTAATTCTGGCCGTCCATACACACTTAGGCACTTGCCGAAGTATATGACACCACCAGCTACATGGAGATTTGGCTTGTGA
Protein
MALIGPKTTIAAVFIGPFLVACMLGIGLVYLLQLQVQIFHVKDTIRVTGKPATVSYTTSTPVTPVATTLDGTTYTLIRPTSSYTRVYLGSSRGFDTSTFGPKTLDYITSSKPHLNSGRPYTLRHLPKYMTPPATWRFGL
Summary
Uniprot
EMBL
Pfam
PF03905
Corona_NS4
Interpro
IPR005603
Corona_NS4
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
139
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.17565
Exp number, first 60 AAs:
23.02183
Total prob of N-in:
0.05646
POSSIBLE N-term signal
sequence
outside
1 - 9
TMhelix
10 - 32
inside
33 - 139
