CoVDB Coronavirus Database (v3)   
Strain
Human_4408_FJ938067 (Region: ;  Strain: Human enteric coronavirus strain 4408, complete genome.;  Date: 17-Apr-09)
Gene
4.9 kD non-structural protein
Description
Annotated in NCBI,  4.9 kD non-structural protein
Location
FJ938067(+):27663-27794
GenBank Accession
ACT11031.1
 

Sequence

CDS
ATGACGACTAAGTTCGTCTTTGCTTTAKTGGCTCCTGACGAYACATTACATCCCTTCAATCATGTTAAGCTAATTATAAGACCCATTGAGGTCGAGCATATTATAACAGCTACCACAATGCCTGCTTTTTAG
Protein
MTTKFVFALXAPDDTLHPFNHVKLIIRPIEVEHIITATTMPAF

Summary

Uniprot
A0A1V0JAZ3  
EMBL
KX982264    MG757138    MG757139    MG757140    MG757141    MG757142    + More
ARD06000.1    AVI15001.1    AVI15012.1    AVI15023.1    AVI15034.1    AVI15045.1   
Pfam
PF06145   Corona_NS1
Interpro
IPR009314   Corona_NS1
ProteinModelPortal
A0A1V0JAZ3  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
43
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00128
Exp number, first 60 AAs:
0.00128
Total prob of N-in:
0.27082
outside
1  -  43
 
 
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