Strain
Murine_FJ938068
(Region: ; Strain: Murine coronavirus; Date: )
Gene
32 kD non-structural protein
Description
Annotated in NCBI,
32 kD non-structural protein
Location
GenBank Accession
Full name
Non-structural protein 2a
Alternative Name
ns2
Sequence
CDS
ATGGCTGCGAAAATGGCCTTTGCTGACAAGCCTAATCATTTCATAAACTTTCCTTTAGCCCAATTTAGTGGCTTTATGGGTAAGTATTTAAAGCTTCAGTCTCAACTTGTGGAAATGGGTTTAGACTGTAAATTACAGAAGGCACCACATGTTAGTATTACTATGCTTGATATTAAAGCAGATCAATACAAACAGGTGGAATTTGCAATACAAGAAATTTTAGATGATCTGGCAGCATATGAGGGATACATTGTCTTTGACAACCCCCATATGCTTGGCAGATGCCTTGTTCTTGATGTTAAAGGATTCGAAGAGTTGCATGTGGATATTGTTGAAATTCTCCGAAAGATGGGTTGCACTGCAGACCAATCCAGAGTATGGATTCCGCACTGCACTGTGGCCCAATTTGAGGAAGAAAAAGAAATAAATGCGATGCAATTCTATTATAAATTACCCTTCTACCTCAAGCATAATAACATATTAACTGATTCTAGGCTTGAGCTTGTGAAGATAGGTTCTTCCAAAATAGATGGGTTTTATTGTAGTGAGCTAAGTGTTTGGTGTGGTGAGAGACTTTGTTATAAGCCTCCAACACCCAAATTTAGCGATATATTTGGCTATTGCTGCATTGAGAAAATACGTGGTGATTTAGAAATTGGCGACCTACCCCAGGATGATGAAGAAGCGTGGGCCGAGCTAAGTTACCACTATCAAAGAAACACCTACTTCTTCAGATATGTGCATGATAATAGTATCTATTTTCGTATCGTATGTAGAATGAAGGGTTGTATGTGTTGA
Protein
MAAKMAFADKPNHFINFPLAQFSGFMGKYLKLQSQLVEMGLDCKLQKAPHVSITMLDIKADQYKQVEFAIQEILDDLAAYEGYIVFDNPHMLGRCLVLDVKGFEELHVDIVEILRKMGCTADQSRVWIPHCTVAQFEEEKEINAMQFYYKLPFYLKHNNILTDSRLELVKIGSSKIDGFYCSELSVWCGERLCYKPPTPKFSDIFGYCCIEKIRGDLEIGDLPQDDEEAWAELSYHYQRNTYFFRYVHDNSIYFRIVCRMKGCMC
Summary
Similarity
Belongs to the coronaviruses ns2a protein family.
Uniprot
Pubmed
EMBL
Pfam
PF05213
Corona_NS2A
ProteinModelPortal
PDB
4Z5V
E-value=2e-135 Score= 380 Identity=90.05%
Cov(Q)=75.85% Cov(P)=96.63%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Topology
Length:
265
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1043
Exp number, first 60 AAs:
0.10163
Total prob of N-in:
0.12557
outside
1 - 265
