CoVDB Coronavirus Database (v3)   
Strain
Murine_FJ938068 (Region: ;  Strain: Murine coronavirus;  Date: )
Gene
internal protein
Description
Annotated in NCBI,  internal protein
GenBank Accession
 

Sequence

CDS
ATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACAAAATAATGGCAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAGCCCAATACCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTCCAGTTTGCAGGTGGACAAGGAGTGCCTATTGCCAATGGAATCCCATCTTCTGAGCAAAAGGGATATTGGTATAGACACAACCGTCGTTCTTTTAAAACACCTGACGGGCAGCAGAAGCAATTACTCCCCAGATGGTATTTTTACTATCTTGGGACGGGCCCCCATGCTGGAGCCAGTTTCGGAGACAGCATTGAGGGAGTCTTCTGGGTTGCAAATAGTCAGGCGGATACCAATACCTCTGCTGACATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAGGGTTTCTATGTTGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAA
Protein
MESSRRPLGLTKPSVDKIMAIEAEGISPSRLQLLSPIPGVWFPITLGFRALPNSRREKSSSLQVDKECLLPMESHLLSKRDIGIDTTVVLLKHLTGSRSNYSPDGIFTILGRAPMLEPVSETALRESSGLQIVRRIPIPLLTLLKGTQVAMRLFLLGLRPVRYCLRVSMLKAREGLHLLVDLVRGHNPVGQIIALEAVPTSASLPLL

Summary

Uniprot
Pfam
PF03187   Corona_I
Interpro
IPR004876   Corona_nucI
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP

Topology

Length:
207
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.35122
Exp number, first 60 AAs:
0.10211
Total prob of N-in:
0.02809
outside
1  -  207
 
 
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