Strain
Bat_GQ153542
(Region: China: Hong Kong; Strain: Bat SARS coronavirus HKU3-7, complete genome.; Date: 15/02/2006)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTCTTCTTGACATTGGTAGCACTTACAACTTGTGAGTTATATCATTATCAGGAGTGTGTTAGAGGTACAACTGTACTACTAAAAGAACCTTGCCCATCAGGAACATACGAGGGCAATTCACCATTTCACCCTCTTGCTGATAATAAATTTGCACTAACTTGCTCTAGCACACACTTTGCTTTTGCTTGTGCTGACGGTACTAGACATACCTATCAGCTGCGTGCAAGATCTGTTTCACCAAAACTTTTCATCAGACAAGAGGACGTTCACCAAGAGCTCTACTCACCACTTTTCCTCATTGTTGCTGCATTAGTATTTATAATACTTTGCTTCACCATTAAGAGAAAGACAGAATGA
Protein
MKIILFLTLVALTTCELYHYQECVRGTTVLLKEPCPSGTYEGNSPFHPLADNKFALTCSSTHFAFACADGTRHTYQLRARSVSPKLFIRQEDVHQELYSPLFLIVAALVFIILCFTIKRKTE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=3e-58 Score= 174 Identity=96.43%
Cov(Q)=68.85% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.36902
Exp number, first 60 AAs:
0.6542
Total prob of N-in:
0.06808
outside
1 - 94
TMhelix
95 - 117
inside
118 - 122
