Strain
Bat_GQ153543
(Region: China: Hong Kong; Strain: Bat SARS coronavirus HKU3-8, complete genome.; Date: 15/02/2006)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGGACCCCAAGACCAACGTAGTGCTCCCCGCATTACATTTGGTGGACCCACAGATTCAACTGACAATAACCAGGATGGAGGACGCAGTGGTGCACGGCCAAAACAACGCCGGCCCCAGGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTTAGATTTCCTCGAGGCCAGGGTGTTCCAATCAACACCAATAGTGGTAAAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPKTNVVLPALHLVDPQIQLTITRMEDAVVHGQNNAGPRVYPIILRLGSQLSLSMARRNLDFLEARVFQSTPIVVKMTKLATTEELPDEFVVVTAK
Summary
Uniprot
EMBL
Pfam
PF09399
SARS_lipid_bind
SUPFAM
SSF141666
SSF141666
ProteinModelPortal
PDB
2CME
E-value=1e-42 Score= 134 Identity=80.68%
Cov(Q)=90.72% Cov(P)=111.39%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00946
Exp number, first 60 AAs:
0.00921
Total prob of N-in:
0.18192
outside
1 - 97
