Strain
Bat_GQ153546
(Region: China: Hong Kong; Strain: Bat SARS coronavirus HKU3-11, complete genome.; Date: 07/03/2007)
Gene
hypothetical protein
Description
Annotated in NCBI,
hypothetical protein
Location
GenBank Accession
Full name
Non-structural protein 7b
Alternative Name
Accessory protein 7b
Sequence
CDS
ATGAATGAGCTCACTTTAATTGACTTCTATTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTCTTATATTTTGGTTCTCGCTTGAGATTCAGGACATAGAAGAACCTTGTAACAAAGTCTAA
Protein
MNELTLIDFYLCFLAFLLFLVLIMLLIFWFSLEIQDIEEPCNKV
Summary
Miscellaneous
Bat coronavirus HKU3 is highly similar to SARS-CoV (SARS-like).
Keywords
Host membrane
Membrane
Reference proteome
Transmembrane
Transmembrane helix
Feature
chain Non-structural protein 7b
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF11395
DUF2873
Interpro
IPR021532
SARS-CoV_Orf7b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
44
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.56869
Exp number, first 60 AAs:
22.56869
Total prob of N-in:
0.60244
POSSIBLE N-term signal
sequence
outside
1 - 9
TMhelix
10 - 32
inside
33 - 44
