CoVDB Coronavirus Database (v3)   
Strain
Avian_GQ427174 (Region: USA;  Strain: Turkey coronavirus strain TCoV/TX-GL/01, complete genome.;  Date: 2001)
Gene
ORF 5b
Description
Annotated in NCBI,  ORF 5b
Location
GQ427174(+):25869-26117
GenBank Accession
ACV87247.1
 

Sequence

CDS
ATGAATAATAGTAAAGATAATCCTTTTCGCGGAGCAATAGCAAGAAAAGCGCGAATTTATCTGAGAGAAGGATTAGATTGTGTTTACTTTCTTAACAAAGCAGGACAAGCAGAGCCTTGTTCCGCGTGTACCTCTTTAGTATTCCAAGGGAAAACTTGTGAGGAACACATAAATAATAACGATCTTTTGTCATGGCAAGCGGTAAGGCAACTGGAAAGACAGACGCCCCAGCGCCAGTCATCAAACTAG
Protein
MNNSKDNPFRGAIARKARIYLREGLDCVYFLNKAGQAEPCSACTSLVFQGKTCEEHINNNDLLSWQAVRQLERQTPQRQSSN

Summary

Uniprot
A0A023PP23  
Pubmed
26482289   
EMBL
KJ425506    AHX26088.1   
Proteomes
UP000149404   
Pfam
PF05528   Coronavirus_5
Interpro
IPR008458   Coronavirus_5
ProteinModelPortal
A0A023PP23  

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
82
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0005
Exp number, first 60 AAs:
0.0005
Total prob of N-in:
0.51288
inside
1  -  82
 
 
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