Strain
Canine_GQ477367
(Region: Taiwan; Strain: Canine coronavirus strain CCoV/NTU336/F/2008, complete genome.; Date: 8-Nov)
Gene
non-structural protein 3a
Description
Annotated in NCBI,
non-structural protein 3a
Location
GenBank Accession
Sequence
CDS
ATGAGTCATTACAGGTCTTGTATGGACATTGTCAAATCTATTGACACATCCGTAGACGCTGTACTTGACGAACTTGATCGTGCATATTTTGCTGTAACTCTTAAAGTAGAGTTCAAAACTGGTAAACTACTTGTGTGTATAGGTTTTGGTGACACACTTCTTGAGGCTAAGGATAAAGCATATGCTAAACTTGGTCTCTCTATTATTGAAGAAGTCAATAGTCATACAGTTGTTTGA
Protein
MSHYRSCMDIVKSIDTSVDAVLDELDRAYFAVTLKVEFKTGKLLVCIGFGDTLLEAKDKAYAKLGLSIIEEVNSHTVV
Summary
Uniprot
EMBL
Proteomes
Pfam
PF04694
Corona_3
Interpro
IPR006784
Coronavirus_Orf3
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
78
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01799
Exp number, first 60 AAs:
0.01799
Total prob of N-in:
0.51611
inside
1 - 78
