Strain
Murine_GU593319
(Region: USA; Strain: Murine hepatitis virus strain S, complete genome.; Date: )
Gene
accessory protein 2a
Description
Annotated in NCBI,
accessory protein 2a
Location
GenBank Accession
Full name
Non-structural protein 2a
Alternative Name
ns2
Sequence
CDS
ATGGCTGCGAGAATGGCCTTTGCTGACAAGCCTAACCATTTTATAAACTTTCCTCTGGCCCAATTTAGTGGCTTTATGGATAAGTATTTAAAGCTTCAGTCTCAACTTGTGGAAATGGGTTTAGACTGTAAATTACAGAAGGCACCACATGTTAGTATTACCTTGCTTGATATAAGCGTGGACCAATACAAACAGGTGGAGTTTGCAATACAAGAAATATTAGATGATCTGGCGGCATATGAGGGAGATATTGTCTTTGACAACCCTCACATGCTTGGCAGATGTCTTGTTCTTGATGTTAAAGGATTTGAAGAGTTGCATGAAGATATTGTTGAAATTCTCCGCAGAAGGGGTTGCATAGCAGATCAATCCAGACAATGGCTTCCGCACTGCACTGTGGCTCAATTTGACGAAGAAAAAGAAACAAAAGAATTGCAATTCTATTTTAAATTGCCCTTCTATCTTAAGCATAACAACATATTAACGGATGCTAGGCTTGAGCTTGTGAAGATAGGTTCTTCCAAAATAGATGGGTTTTATTGTAGTGAGCTGAGTATTTGGTGTGGTGAGAGACTTTGTTATAAGCCCCCAACACCCAAATTCAGCGATATATTTGGCTATTGCTGCATAGAGAAAATACGTGTTGATTTAGAAATTGGTGACCTACCAGAGGATGATGAAGAAGCGTGGGCCGAGCTAAGTTACCACTATCAAAGAAACATCTACTTCTTCAGACATGTGCATGATAATAGCATTTATTTTCGTACCGTATGTAGAATGAAGGGTTGTATGTGTTGA
Protein
MAARMAFADKPNHFINFPLAQFSGFMDKYLKLQSQLVEMGLDCKLQKAPHVSITLLDISVDQYKQVEFAIQEILDDLAAYEGDIVFDNPHMLGRCLVLDVKGFEELHEDIVEILRRRGCIADQSRQWLPHCTVAQFDEEKETKELQFYFKLPFYLKHNNILTDARLELVKIGSSKIDGFYCSELSIWCGERLCYKPPTPKFSDIFGYCCIEKIRVDLEIGDLPEDDEEAWAELSYHYQRNIYFFRHVHDNSIYFRTVCRMKGCMC
Summary
Similarity
Belongs to the coronaviruses ns2a protein family.
Uniprot
Pubmed
EMBL
Pfam
PF05213
Corona_NS2A
ProteinModelPortal
PDB
4Z5V
E-value=4e-137 Score= 384 Identity=91.04%
Cov(Q)=75.85% Cov(P)=96.63%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
265
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01033
Exp number, first 60 AAs:
0.01015
Total prob of N-in:
0.13013
outside
1 - 265
