Strain
Mink_HM245926
(Region: USA: Minnesota; Strain: Mink coronavirus strain WD1133, complete genome.; Date: 1-Jan-98)
Gene
non-structural protein 7a
Description
Annotated in NCBI,
non-structural protein 7a
Location
GenBank Accession
Full name
Non-structural protein 7a
Alternative Name
11 kDa protein
Accessory protein 7a
X3 protein
Accessory protein 7a
X3 protein
Sequence
CDS
ATGCTAGTATGTCTGCATGTTGTCCTGGTTCTAGTATTAATATGCTTGATTTCGAGGCGTATTAAATTACTAGAGCAGTTAGTGCTTAATGCCATTCTCAATTTAACTACACTAACTAACGTGCTTGATATAGCCGATAGTGGTGTGAAGGTTAAATATTTTCAATTATTAAAACCTGATTGTCTAGATCTTTATAGTTTGCAGCGTGCTATTGTTGAAGTGCGCATTCTTAGACTATTGATTAGGGTTTTATTCTTTATTGTGCTATTCTATCTCATTGTATGCGTTTTAATCTGA
Protein
MLVCLHVVLVLVLICLISRRIKLLEQLVLNAILNLTTLTNVLDIADSGVKVKYFQLLKPDCLDLYSLQRAIVEVRILRLLIRVLFFIVLFYLIVCVLI
Summary
Similarity
Belongs to the coronaviruses ns7/ns7a protein family.
Keywords
Host membrane
Membrane
Signal
Transmembrane
Transmembrane helix
Feature
chain Non-structural protein 7a
Uniprot
Pubmed
EMBL
PRIDE
Pfam
PF02398
Corona_7
Interpro
IPR003449
Corona_7
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
98
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.90971
Exp number, first 60 AAs:
18.21617
Total prob of N-in:
0.73743
POSSIBLE N-term signal
sequence
inside
1 - 1
TMhelix
2 - 21
outside
22 - 74
TMhelix
75 - 97
inside
98 - 98
