Strain
Feline_JN634064
(Region: ; Strain: Feline coronavirus strain WSU 79-1683, complete genome.; Date: )
Gene
7a
Description
Annotated in NCBI,
7a
Location
GenBank Accession
Full name
Non-structural protein 7a
Alternative Name
11 kDa protein
Accessory protein 7a
Accessory protein 7a
Sequence
CDS
ATGCTCGTTTTTCTCCATGCTGTACTTGTAACAGCTTTAATCTTACTACTAATTGGTAGAATCCAATTACTAGAAAGGTTGTTACTCAGTCATCTGCTTAATCTCACGACAGACAGTTATGTTTTAGGTGTGCCTGACAGTAGCCTGCGAGTAAACTGCTTACAGCTTTTGAAACCAGACTGCCTTGATTTTAACATCTTACATAAAGTTTTAGCAGAAACCAGATTACTAGTAGTAGTACTGCGAGTGATCTTTCTAGTTCTTCTAGGGTTTTCCTGCTATACATTGTTGGGTGCATTATTTTAA
Protein
MLVFLHAVLVTALILLLIGRIQLLERLLLSHLLNLTTDSYVLGVPDSSLRVNCLQLLKPDCLDFNILHKVLAETRLLVVVLRVIFLVLLGFSCYTLLGALF
Summary
Similarity
Belongs to the coronaviruses ns7/ns7a protein family.
Keywords
Host membrane
Membrane
Reference proteome
Signal
Transmembrane
Transmembrane helix
Feature
chain Non-structural protein 7a
Uniprot
Proteomes
Pfam
PF02398
Corona_7
Interpro
IPR003449
Corona_7
ProteinModelPortal
Ontologies
KEGG
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
101
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.07612
Exp number, first 60 AAs:
22.30947
Total prob of N-in:
0.91972
POSSIBLE N-term signal
sequence
inside
1 - 1
TMhelix
2 - 24
outside
25 - 77
TMhelix
78 - 100
inside
101 - 101
