Strain
Rabbit_JN874559
(Region: China; Strain: Rabbit coronavirus HKU14 strain HKU14-1, complete genome.; Date: 2006)
Gene
NS2a1 protein
Description
Annotated in NCBI,
NS2a1 protein
Location
GenBank Accession
Sequence
CDS
ATGGCTGTCGCTTATGCTGATATGCCTAATCATTTTATCAATTTTTCACTTACCCATTTTGAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTTCAAATTCTTGATGTAGGAGTGGATTGTAAAATATAA
Protein
MAVAYADMPNHFINFSLTHFEGFVLNYKGLQFQILDVGVDCKI
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=4e-11 Score=54.3 Identity=55.00%
Cov(Q)=93.02% Cov(P)=19.23%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
43
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.73263
Exp number, first 60 AAs:
0.73263
Total prob of N-in:
0.43000
outside
1 - 43
