CoVDB Coronavirus Database (v3)   
Strain
Rabbit_JN874559 (Region: China;  Strain: Rabbit coronavirus HKU14 strain HKU14-1, complete genome.;  Date: 2006)
Gene
NS2a2 protein
Description
Annotated in NCBI,  NS2a2 protein
Location
JN874559(+):21829-22020
GenBank Accession
AFE48791.1
 

Sequence

CDS
ATGCTGGATATACAGCCTGAAGACTATATAAGTGTTGATGTCGCTATTCAAGAAGTTATTGATGATATGCATTGGTGTGATGGTTTTCAGATTAAGTTTGAGAACCCTCACATCCTAGGAAGATGCATAGTTTTAGATATTAAAGGTGTAGAAGAATTGCATGATGATTTAGTTAATTACACTCGTGACTAA
Protein
MLDIQPEDYISVDVAIQEVIDDMHWCDGFQIKFENPHILGRCIVLDIKGVEELHDDLVNYTRD

Summary

Uniprot
A0A1V0IGF4  
EMBL
KY419103    ARC95201.1   
Pfam
PF05213   Corona_NS2A
Interpro
IPR039573   NS2A-like
IPR009097   Cyclic_Pdiesterase
SUPFAM
SSF55144   SSF55144
ProteinModelPortal
A0A1V0IGF4  
PDB
4Z5V     E-value=4e-16     Score=68.6     Identity=53.23%     Cov(Q)=98.41%     Cov(P)=29.81%
3D Structure

Ontologies

Subcellular Location

From MSLVP
Cytoplasm

Topology

Length:
63
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.21643
outside
1  -  63
 
 
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