Strain
Porcine_JQ023161
(Region: South Korea; Strain: Porcine epidemic diarrhea virus strain virulent DR13, complete genome.; Date: 2009)
Gene
membrane protein
Description
Annotated in NCBI,
membrane protein
Location
GenBank Accession
Sequence
CDS
ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATTCAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGCTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTCTTTGACGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGTATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTACGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTCTAA
Protein
MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSVLLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
Summary
Uniprot
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
226
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
79.76539
Exp number, first 60 AAs:
36.46957
Total prob of N-in:
0.05217
POSSIBLE N-term signal
sequence
outside
1 - 19
TMhelix
20 - 38
inside
39 - 42
TMhelix
43 - 65
outside
66 - 74
TMhelix
75 - 97
inside
98 - 226
