CoVDB Coronavirus Database (v3)   
Strain
Avian_JQ065045 (Region: China: Hong Kong;  Strain: Sparrow coronavirus HKU17 strain HKU17-6124, complete genome.;  Date: 2007)
Gene
NS7b protein
Description
Annotated in NCBI,  NS7b protein
Location
JQ065045(+):25539-25751
GenBank Accession
AFD29215.1
 

Sequence

CDS
ATGCTTAGCTTTGGATACTACATCCTCAAGTTCATCTGCCTCACCTTCTTCGGAGTCTTTAACCCGAAGGTCGCCGAGGCAGTAGGTCCGTTCATCGACCTTGAAATTGTAGGGTTTCAGGCCTTTATAACATGGATTCTTGTCGTACGCCCACGTATGGCAAACTTCATGCTTGGCCAACCAATTCTTGTGCGCAAGCACCAAATGATATAG
Protein
MLSFGYYILKFICLTFFGVFNPKVAEAVGPFIDLEIVGFQAFITWILVVRPRMANFMLGQPILVRKHQMI

Summary

Uniprot
A0A2Z4EVY8  
Pubmed
29872066   
EMBL
MG812378    AWV67141.1   
ProteinModelPortal
A0A2Z4EVY8  

Ontologies

GO
GO:0016021  C:integral component of membrane

Subcellular Location

From MSLVP
Multi-Pass Membrane

Topology

Length:
70
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
36.19241
Exp number, first 60 AAs:
36.17795
Total prob of N-in:
0.66806
POSSIBLE N-term signal
sequence
outside
1  -  26
TMhelix
27  -  49
inside
50  -  70
 
 
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