CoVDB Coronavirus Database (v3)   
Strain
Avian_JQ065046 (Region: China: Hong Kong;  Strain: Magpie-robin coronavirus HKU18 strain HKU18-chu3, complete genome.;  Date: 2007)
Gene
NS7a protein
Description
Annotated in NCBI,  NS7a protein
Location
JQ065046(+):25407-25580
GenBank Accession
AFD29222.1
 

Sequence

CDS
ATGATCATAGACCTCACTTCCTATCATTCACATCTCAGTGGGGTTCTTAGGACACTAACCAGCATCTTTTCCATTGCCCTCTTCGACGAATACGAAGGCGCATTTTGGGTGTCTGGCCATTTTATTGAATCACTCTCCTTTGAAGGCCCTGATTATGTTTCAGAGGAAGACTAA
Protein
MIIDLTSYHSHLSGVLRTLTSIFSIALFDEYEGAFWVSGHFIESLSFEGPDYVSEED

Summary

Uniprot
H9BR13  
Pubmed
22278237   
EMBL
JQ065046    AFD29222.1   
Proteomes
UP000162232   
ProteinModelPortal
H9BR13  

Ontologies

KEGG
vg:11945648    

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
57
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.39414
Exp number, first 60 AAs:
1.39414
Total prob of N-in:
0.31990
outside
1  -  57
 
 
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