CoVDB Coronavirus Database (v3)   
Strain
Avian_JQ065048 (Region: China: Hong Kong;  Strain: Wigeon coronavirus HKU20 strain HKU20-9243, complete genome.;  Date: 2008)
Gene
NS7a protein
Description
Annotated in NCBI,  NS7a protein
Location
JQ065048(+):24695-24928
GenBank Accession
AFD29239.1
 

Sequence

CDS
ATGAGCCTTGTCATAGATGGAGATCCACTACAGGTGGCAGATGTTCTTAGACAACTGTCGCTCATTTTTCACACCCCTATCTATGATTGTAATCTCCGGCTACACTGGGTTGAAGGAGTGCCTTGCACACTTTCTTTTTGTGAGTTGTGCTATGACTTCCTTCAGCCTATCCAAGCTGATTCTCCTGGTTTTAGTGATTCTAGTACCAGTCCAGATTTTGTTGATTCTCAATAA
Protein
MSLVIDGDPLQVADVLRQLSLIFHTPIYDCNLRLHWVEGVPCTLSFCELCYDFLQPIQADSPGFSDSSTSPDFVDSQ

Summary

Uniprot
H9BR30  
Pubmed
22278237   
EMBL
JQ065048    AFD29239.1   
Proteomes
UP000167590   
ProteinModelPortal
H9BR30  

Ontologies

KEGG
vg:11945670    

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
77
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0142
Exp number, first 60 AAs:
0.0142
Total prob of N-in:
0.05302
outside
1  -  77
 
 
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