Strain
Camel_JQ410000
(Region: USA; Strain: Alpaca respiratory coronavirus isolate CA08-1/2008, complete genome.; Date: 2008)
Gene
putative X protein
Description
Annotated in NCBI,
putative X protein
Location
GenBank Accession
Sequence
CDS
ATGAAGTCAACTAAACATGCATCCAGAAGATTTGGAATGGTTTTAGTTGAGGGTTCTATGATTTGGCTAATGGCCACTGTGTTGTTTGAAATCATTCAATTGTTAGTTGTTGCTAATTCAGATGGTTTGTATGTGGTTTTAAGTTGGAATTTTGCTTTTGTTCTTGCTTTTATTATCTTTCTGCTGCCTGTTTCTAGAGAGATTTGGCGCCCTGGTGCCGTAGATGAGTATATTGCTTTTCTCCGATCTATGCATGATGGCATGATCAGAGCTGCTTTTAATTAA
Protein
MKSTKHASRRFGMVLVEGSMIWLMATVLFEIIQLLVVANSDGLYVVLSWNFAFVLAFIIFLLPVSREIWRPGAVDEYIAFLRSMHDGMIRAAFN
Summary
Uniprot
EMBL
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host cytoplasm. Host nucleus. Host mitochondrion.
Topology
Length:
94
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.14384
Exp number, first 60 AAs:
39.27565
Total prob of N-in:
0.93361
POSSIBLE N-term signal
sequence
inside
1 - 12
TMhelix
13 - 32
outside
33 - 41
TMhelix
42 - 64
inside
65 - 94
