Strain
Porcine_KC962433
(Region: China; Strain: Transmissible gastroenteritis virus isolate TGEV-HX, complete genome.; Date: 5-May-12)
Gene
ORF7
Description
Annotated in NCBI,
ORF7
Location
GenBank Accession
Sequence
CDS
ATGCTCGTCTTCCTCCATGCTGTATTTATTACAGTTTTAATCTTACTACTAATTGGTAGACTCCAATTATTAGAAAGACTATTACTTAATCACTCTTTCAATCTTAAAACTGTCAATGACTTTAATATCTTATATAGGAGTTTAGCAGAAACCAGATTACTAAAAGTGGTGCTTCGAGTAATCTTTCTAGTCTTACTAGGATTTTGCTGCTACAGATTGTTAGTCACATTAATGTAA
Protein
MLVFLHAVFITVLILLLIGRLQLLERLLLNHSFNLKTVNDFNILYRSLAETRLLKVVLRVIFLVLLGFCCYRLLVTLM
Summary
Uniprot
EMBL
Proteomes
Pfam
PF02398
Corona_7
Interpro
IPR003449
Corona_7
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
78
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.5847
Exp number, first 60 AAs:
27.52852
Total prob of N-in:
0.93206
POSSIBLE N-term signal
sequence
inside
1 - 1
TMhelix
2 - 24
outside
25 - 55
TMhelix
56 - 75
inside
76 - 78
