Strain
Murine_KF268337
(Region: USA: Philadelphia; Strain: Murine coronavirus strain MHV/BHKR_lab/USA/icA59_17Cl1/2012, complete genome.; Date: 25-Oct-12)
Gene
non-structural protein 4
Description
Annotated in NCBI,
non-structural protein 4
Location
GenBank Accession
Sequence
CDS
ATGAGGATTGACTATCACAGCCCCTGCAGGAAAGACAGAAAATCTAAACAATTTATAGCATTCTCATTGCTACCTGGCCCCGTAAGAGGCAGTCATAGCTATGGCCGTGTTGGTCCTAAGGCTACATTGGCTGCTGTCTTTATTGGTCCATTTATTGTAGCATGTATGCTAGGCATTGGCCTAGTTTATTTATTGCAATTGCAAGTTCAAATTTTTCATGTTAAGGATACCATACGTGTGACTGGCAAGCCAGCCACTGTGTCTTATACTACAAGTACACCAGTAACACCGAGCGCGACGACGCTCGATGGTACTACGTATACTTTAATTAGACCCACTAGCTCTTATACAAGAGTTTATCTTGGTACTCCAAGAGGTTTTGATTATAGTACATTTGGGCCTAAGACCCTAGATTATGTTACTAATCTAAACCTCATCTTAATTCTGGTCGTCCATATACTTTTAAGGCATTGTCCAGGCATATGA
Protein
MRIDYHSPCRKDRKSKQFIAFSLLPGPVRGSHSYGRVGPKATLAAVFIGPFIVACMLGIGLVYLLQLQVQIFHVKDTIRVTGKPATVSYTTSTPVTPSATTLDGTTYTLIRPTSSYTRVYLGTPRGFDYSTFGPKTLDYVTNLNLILILVVHILLRHCPGI
Summary
Uniprot
EMBL
Pfam
PF03905
Corona_NS4
Interpro
IPR005603
Corona_NS4
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
161
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.97082
Exp number, first 60 AAs:
17.87364
Total prob of N-in:
0.83114
POSSIBLE N-term signal
sequence
inside
1 - 42
TMhelix
43 - 65
outside
66 - 135
TMhelix
136 - 155
inside
156 - 161
