CoVDB Coronavirus Database (v3)   
Strain
Human_SARS_KF514398 (Region: USA: Nashville, TN;  Strain: SARS coronavirus wtic-MB strain SARS/VeroE6_lab/USA/WTic_c1.10P20/2010, complete genome.;  Date: 1-Oct-10)
Gene
non-structural protein 8a
Description
Annotated in NCBI,  non-structural protein 8a
Location
KF514398(+):27759-27878
GenBank Accession
AGT20951.1
 

Sequence

CDS
ATGAAACTTCTCATTGTTTTGACTTGTATTTCTCTATGCAGTTGCATATGCACTGTAGTACAGCGCTGTGCATCTAATAAACCTCATGTGCTTGAAGATCCTTGTAAGGTACAACACTAG
Protein
MKLLIVLTCISLCSCICTVVQRCASNKPHVLEDPCKVQH

Summary

Uniprot
A0A2D1PX66  
Pubmed
29190287   
EMBL
KY417144    ATO98140.1   
Pfam
PF12093   Corona_NS8
Interpro
IPR022722   Corona_NS8
ProteinModelPortal
A0A2D1PX66  

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
39
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.15178
Exp number, first 60 AAs:
4.15178
Total prob of N-in:
0.30065
outside
1  -  39
 
 
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