Strain

Human_SARS_KF514413 (Region: USA: Nashville, TN; Strain: SARS coronavirus wtic-MB strain SARS/VeroE6_lab/USA/WTic_c1.6P20/2010, complete genome.; Date: 1-Oct-10)

Gene

non-structural protein 7b

Description

Annotated in NCBI, non-structural protein 7b

Location

KF514413(+):27618-27752

GenBank Accession

AGT21175.1

Full name

Protein non-structural 7b

Alternative Name

Accessory protein 7b

Sequence

CDS

ATGAATGAGCTCACTTTAATTGACTTCTATTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATAATGCTTATTATATTTTGGTTTTCACTCGAAATCCAGGATCTAGAAGAACCTTGTACCAAAGTCTAA

Protein

MNELTLIDFYLCFLAFLLFLVLIMLIIFWFSLEIQDLEEPCTKV

Summary

Keywords

Host membrane Membrane Reference proteome Transmembrane Transmembrane helix

Feature

chain Protein non-structural 7b

Uniprot

Q7TFA1

Pubmed

12730500 12730501 12917450 17037516

EMBL

AY278741 AY274119 AY291315

Proteomes

UP000000354 UP000137377

Pfam

PF11395 DUF2873

Interpro

IPR021532 SARS-CoV_Orf7b

ProteinModelPortal

Q7TFA1

Ontologies

KEGG

vg:1489675

GO:0033644 C:host cell membrane
GO:0016021 C:integral component of membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Host membrane

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

22.52519

Exp number, first 60 AAs:

22.52519

Total prob of N-in:

0.73639

POSSIBLE N-term signal

sequence

inside

1 - 8

TMhelix

9 - 31

outside

32 - 44