CoVDB Coronavirus Database (v3)   
Strain
Human_SARS_KF514414 (Region: USA: Nashville, TN;  Strain: SARS coronavirus ExoN1 strain SARS/VeroE6_lab/USA/ExoN1_c5P20/2009, complete genome.;  Date: 8-Jul-09)
Gene
non-structural protein 6
Description
Annotated in NCBI,  non-structural protein 6
Location
KF514414(+):27054-27245
GenBank Accession
AGT21188.1
 

Sequence

CDS
ATGTTTCATCTTGTTGACTTCCAGGTTACAATAGCAGAGATATTGATTATCATTATGAGGACTTTCAGGATTGCTATTTGGAATCTTGACGTTATAATAAGTTCAATAGTGAGACAATTATTTAAGCCTCTAACTAAGAAGAATTATTCGGAGTTAGATGATGAAGAACCTATGGAGTTAGATTATCCATAA
Protein
MFHLVDFQVTIAEILIIIMRTFRIAIWNLDVIISSIVRQLFKPLTKKNYSELDDEEPMELDYP

Summary

Uniprot
A0A2R3SUW5  
EMBL
MG772933    MG772934    AVP78035.1    AVP78046.1   
Pfam
PF12133   Sars6
Interpro
IPR022736   SARS_NS6
ProteinModelPortal
A0A2R3SUW5  

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
63
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
12.55933
Exp number, first 60 AAs:
12.55933
Total prob of N-in:
0.14589
POSSIBLE N-term signal
sequence
outside
1  -  63
 
 
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