CoVDB Coronavirus Database (v3)   
Strain
Human_OC43_KF530096 (Region: USA: Nashville, TN;  Strain: Human coronavirus OC43 strain OC43/human/USA/911-38/1991, complete genome.;  Date: 15-Jan-91)
Gene
protein I
Description
Annotated in NCBI,  protein I
GenBank Accession
 

Sequence

CDS
ATGGCATCCTTAAGTGGGCCGATCAGTCCGACCAGTTTAGAAATGTTCAAACCAGGGGTAGAAGAGCTCAACCCAAGCAAACTGCTACTTCTCAGCAACCATCAGGAGGGAATGTTGTACCCTACTATTCTTGGTTCTCTGGAATTACTCAGTTTCAAAAAGGAAAGGAGTTTGAGTTTGCAGAAGGACAAGGTGTGCCTATTGCACCAGGAGTCCCAGCTACTGAAGCTAAGGGGTACTGGTACAGACACAACAGACGTTCTTTTAAAACAGCCGATGGCAACCAGCGTCAACTGCTGCCACGATGGTATTTTTACTATCTGGGAACAGGACCGCATGCTAAAGACCAGTACGGCACCGATATTGATGGAATCTACTGGGTCGCTAGCAACCAGGCTGATGTCAATACCCCGGCTGACATTGTCGATCGGGACCCAAGTAGCGATGAGGCTATTCCGACTAGGTTTCCGCCTGGCACGGTACTCCCTCAGGGTTACTATATTGAAGGCTCAGGAAGGTCTGCTCCTAATTCCAGATCTACTTCGCGCACATCCAGTAGAGCCTCTAGTGCAGGATCGCGTAGTAGAGCCAATTCTGGCAATAGAACCCCTACCTCTGGTGTAA
Protein
MASLSGPISPTSLEMFKPGVEELNPSKLLLLSNHQEGMLYPTILGSLELLSFKKERSLSLQKDKVCLLHQESQLLKLRGTGTDTTDVLLKQPMATSVNCCHDGIFTIWEQDRMLKTSTAPILMESTGSLATRLMSIPRLTLSIGTQVAMRLFRLGFRLARYSLRVTILKAQEGLLLIPDLLRAHPVEPLVQDRVVEPILAIEPLPLV

Summary

Uniprot
Pfam
PF03187   Corona_I
Interpro
IPR004876   Corona_nucI
ProteinModelPortal

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
207
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11037
Exp number, first 60 AAs:
0.01117
Total prob of N-in:
0.00981
outside
1  -  207
 
 
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