Strain
Bat_KF569996
(Region: China; Strain: Rhinolophus affinis coronavirus isolate LYRa11, complete genome.; Date: 2011)
Gene
protein 13
Description
Annotated in NCBI,
protein 13
Location
GenBank Accession
Sequence
CDS
ATGGACCCCAACAAAATCAACGTAGTGCCCCCCGCATTACATTTGGTGGACCCACAGATTCAGCTGACAATAACCAGAATGGAGAACGCAGTGGGGCAAGGCCAAAACAGCGCAGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTTAGATTCCCTCGAGGCCAGGGCGTTCCAATCAACACCAATAGTGGTACAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGA
Protein
MDPNKINVVPPALHLVDPQIQLTITRMENAVGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK
Summary
Uniprot
EMBL
Pfam
PF09399
SARS_lipid_bind
SUPFAM
SSF141666
SSF141666
ProteinModelPortal
PDB
2CME
E-value=3e-48 Score= 147 Identity=86.67%
Cov(Q)=91.84% Cov(P)=113.92%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
98
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00181
Exp number, first 60 AAs:
0.00158
Total prob of N-in:
0.25848
outside
1 - 98
