Strain
Dolphin_KF793824
(Region: Germany; Strain: Bottlenose dolphin coronavirus HKU22 isolate CF090325, complete genome.; Date: 2008-2010)
Gene
NS5b protein
Description
Annotated in NCBI,
NS5b protein
Location
GenBank Accession
Sequence
CDS
ATGGGTAATTTCCTTTCTAATATATTTACAGTTCAGGTTAGCACCAACCACAACGCACATGTAGTGCAAGCTGGTCATGATGCTAGCCTTGCAGCTTCTGCTAGTAATATGCAAATGCACTTTTCTGTTACGCTAGTTATTACTAGCATGTTGATGTTTGTGATTATTTTTGTTATGCTTTTTATGCTATGTAGTATACGTAGACATTTAATGCCCAATAAGGGGCGAACGCTTATAGGACGTGCCACTCGTGCTATAAGGCGTACTTTTAAGAGCAAAAAGGGAGGGAGCAAAGATATGGAAGAGCTTCAGCCTCTAAATAACCAAATCAAGCATTCCTCAGTTGAATTTAAAAAGAATTTGCTCACTATGATTAATGAGGTGGATAAAATTGAAGCCTCTAGAAAGGAAGAGCCATTTTACGAGGAAATTAAACTTAAGCCGAGTACTAAGAAGTACCGTGCACCTCAGCCTCCTAAGATAAGCTCTACACCTATTTATATTAATCATGTTGGGTAG
Protein
MGNFLSNIFTVQVSTNHNAHVVQAGHDASLAASASNMQMHFSVTLVITSMLMFVIIFVMLFMLCSIRRHLMPNKGRTLIGRATRAIRRTFKSKKGGSKDMEELQPLNNQIKHSSVEFKKNLLTMINEVDKIEASRKEEPFYEEIKLKPSTKKYRAPQPPKISSTPIYINHVG
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
172
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.74378
Exp number, first 60 AAs:
18.44116
Total prob of N-in:
0.12906
POSSIBLE N-term signal
sequence
outside
1 - 43
TMhelix
44 - 66
inside
67 - 172
