Strain
Camel_KF906251
(Region: United Arab Emirates: Dubai; Strain: Dromedary camel coronavirus HKU23 strain HKU23-368F, complete genome.; Date: 21-May-13)
Gene
NS2 protein
Description
Annotated in NCBI,
NS2 protein
Location
GenBank Accession
Sequence
CDS
ATGGCAGTCGCTTATGCAGACAAGCCTAATCACTTTATCAATTTTCCACTTACCCAGTTTCAGGGTTTTGTGTTAAATTATAAAGGTTTACAATTTCAACTTCTCGATGAAGGAGTGGATTGTAAAATACAAACAGCGCCTCACATTAGTCTTGCTATGCTGGATATTCAGCCTGAAGACTACAGGAGTGTTGATGTTGCTATTCAAGAAGTTATTGATGACATGCATTGGGGTGAGGGCTTTCAGATTAAATTTGGTAACCCTCATATCCTAGGAAGATGCATAGTTTTAGATGTTAAAGGTGTAGAAGAATTGCATGGTGATTTAGTTAATTACATTCGTGATAAAGGTTGTGTTGCTGACCAATCCAGGAAATGGATTGGACATTGCACCATAGCCCAACTCACGGATGCTGCACTTTCCATTAAGGAAAATGTTGACTTCATAAACAGCATGCAATTCAATTATAAAATCACTATCAATCCTTCATCACCGGCTAGGCTTGAAATAGTTAAGCTTGGTGCTGAAAAGAAAGATGGTTTTTATGAAGCCATAGTTAGCCACTGGATGGGAATTCGTTTTGAATATACACCACCCACTGATAAGCTAGCTATGATTATGGGTTATTGTTGTTTAGAAGTGGTGCGTAAAGAGCTAGAAGAAGGTGATCTTCCCGAGAATGATGATGATGCTTGGTTTAAGCTATCGTACCATTATGAAAACAATTCTTGGTTCTTTCGACATGTCTACAGGAAAAGTTTTTATTTCCGTAAGTCTTGTCAAAATTTAGATTGTAATTGTTTGGGGTTTTATGAATCTTCATTTGAAGAAGACTAA
Protein
MAVAYADKPNHFINFPLTQFQGFVLNYKGLQFQLLDEGVDCKIQTAPHISLAMLDIQPEDYRSVDVAIQEVIDDMHWGEGFQIKFGNPHILGRCIVLDVKGVEELHGDLVNYIRDKGCVADQSRKWIGHCTIAQLTDAALSIKENVDFINSMQFNYKITINPSSPARLEIVKLGAEKKDGFYEAIVSHWMGIRFEYTPPTDKLAMIMGYCCLEVVRKELEEGDLPENDDDAWFKLSYHYENNSWFFRHVYRKSFYFRKSCQNLDCNCLGFYESSFEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF05213
Corona_NS2A
Interpro
IPR039573
NS2A-like
ProteinModelPortal
PDB
4Z5V
E-value=2e-66 Score= 206 Identity=51.74%
Cov(Q)=72.30% Cov(P)=96.63%
3D Structure
Ontologies
KEGG
Subcellular Location
From MSLVP
Cytoplasm
Topology
Length:
278
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0428600000000001
Exp number, first 60 AAs:
0.04205
Total prob of N-in:
0.06667
outside
1 - 278
