CoVDB Coronavirus Database (v3)   
Strain
Avian_KJ425487 (Region: China;  Strain: Infectious bronchitis virus strain ck/CH/LHB/110526, complete genome.;  Date: 26-May-11)
Gene
ORF3a
Description
Annotated in NCBI,  ORF3a
Location
KJ425487(+):23802-23975
GenBank Accession
AHX25912.1
 

Sequence

CDS
ATGATCCAAAGTCCCACGTCCTTCTTAATAGTATTAATTTTGCTTTGGTGTAAACTTGTATTAAGTTGTTTTAGAGAGTTTATTATAGCGCTTCAACAACTAACACAAGTTTTACTCCAAATTATCGATAGTAATTTACAGTCTAGACTGACCCTTTGGCACAGTCTAGACTAA
Protein
MIQSPTSFLIVLILLWCKLVLSCFREFIIALQQLTQVLLQIIDSNLQSRLTLWHSLD

Summary

Uniprot
A5Z139  
Pubmed
18295413    29141204   
EMBL
EF602450    KY799582    ABQ84847.1    AVI69486.1   
Pfam
PF03617   IBV_3A
Interpro
IPR005214   IBV_3A
ProteinModelPortal
A5Z139  

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
57
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.14708
Exp number, first 60 AAs:
22.14708
Total prob of N-in:
0.91788
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  57
 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

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